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Biomedical Information Retrieval

3개 벤치마크 · 논문 19편 · 이 태스크의 논문 보기 →

Benchmarks

NFCorpus (BEIR)

결과 7개

BioASQ (BEIR)

결과 6개

TREC-COVID (BEIR)

결과 6개

Most implemented

Papers

BioHiCL: Hierarchical Multi-Label Contrastive Learning for Biomedical Retrieval with MeSH Labels

2026-04-17 · Mengfei Lan, Lecheng Zheng, Halil Kilicoglu arxiv

Effective biomedical information retrieval requires modeling domain semantics and hierarchical relationships among biomedical texts. Existing biomedical generative retrievers build on coarse binary relevance signals, lim…

Biomedical Information RetrievalContrastive LearningQuestion Answering

BioMedSearch: A Multi-Source Biomedical Retrieval Framework Based on LLMs

2025-10-15 · Congying Liu, Xingyuan Wei, Peipei Liu, Yiqing Shen 외 arxiv

Biomedical queries often rely on a deep understanding of specialized knowledge such as gene regulatory mechanisms and pathological processes of diseases. They require detailed analysis of complex physiological processes …

Biomedical Information RetrievalQuestion Answering

Ontology-Guided Query Expansion for Biomedical Document Retrieval using Large Language Models

2025-08-15 · Zabir Al Nazi, Vagelis Hristidis, Aaron Lawson McLean, Jannat Ara Meem 외 arxiv

Effective Question Answering (QA) on large biomedical document collections requires effective document retrieval techniques. The latter remains a challenging task due to the domain-specific vocabulary and semantic ambigu…

Biomedical Information RetrievalQuestion Answering

Towards Domain Specification of Embedding Models in Medicine

2025-07-25 · Mohammad Khodadad, Ali Shiraee Kasmaee, Mahdi Astaraki, Hamidreza Mahyar arxiv

Medical text embedding models are foundational to a wide array of healthcare applications, ranging from clinical decision support and biomedical information retrieval to medical question answering, yet they remain hamper…

Biomedical Information RetrievalContrastive LearningQuestion Answering

Interpretability Analysis of Domain Adapted Dense Retrievers

2025-01-24 · Goksenin Yuksel, Jaap Kamps

Dense retrievers have demonstrated significant potential for neural information retrieval; however, they exhibit a lack of robustness to domain shifts, thereby limiting their efficacy in zero-shot settings across diverse…

Biomedical Information RetrievalDomain AdaptationInformation RetrievalQuestion Answering+2

MedCPT: Contrastive Pre-trained Transformers with Large-scale PubMed Search Logs for Zero-shot Biomedical Information Retrieval

2023-07-02 · Qiao Jin, Won Kim, Qingyu Chen, Donald C. Comeau 외

Information retrieval (IR) is essential in biomedical knowledge acquisition and clinical decision support. While recent progress has shown that language model encoders perform better semantic retrieval, training such mod…

Biomedical Information RetrievalContrastive LearningInformation RetrievalLanguage Modeling+4

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