Protein Secondary Structure Prediction
8개 벤치마크 · 논문 29편 · 이 태스크의 논문 보기 →
Benchmarks
CB513
CASP12
TS115
PS4
2017_test set
2019_test set
CullPDB
Jpred4 blind set
Most implemented
High Quality Prediction of Protein Q8 Secondary Structure by Diverse Neural Network Architectures
PS4: a Next-Generation Dataset for Protein Single Sequence Secondary Structure Prediction
Papers
Multi-objective Genetic Programming with Multi-view Multi-level Feature for Enhanced Protein Secondary Structure Prediction
Predicting protein secondary structure is essential for understanding protein function and advancing drug discovery. However, the intricate sequence-structure relationship poses significant challenges for accurate modeli…
Protein Secondary Structure PredictionDrug DiscoveryProtein Secondary Structure Prediction Using Transformers
Predicting protein secondary structures such as alpha helices, beta sheets, and coils from amino acid sequences is essential for understanding protein function. This work presents a transformer-based model that applies a…
Protein Secondary Structure PredictionData AugmentationProtein Secondary Structure Prediction Using 3D Graphs and Relation-Aware Message Passing Transformers
In this study, we tackle the challenging task of predicting secondary structures from protein primary sequences, a pivotal initial stride towards predicting tertiary structures, while yielding crucial insights into prote…
Protein Secondary Structure PredictionProtein Language ModelSingle-Sequence-Based Protein Secondary Structure Prediction using One-Hot and Chemical Encodings of Amino Acids
In protein secondary structure prediction, each amino acid in sequence is typically treated as a distinct category and represented by a one-hot vector. In this study, we developed two novel chemical representations for a…
Dimensionality ReductionProtein Secondary Structure PredictionA Protein Structure Prediction Approach Leveraging Transformer and CNN Integration
Proteins are essential for life, and their structure determines their function. The protein secondary structure is formed by the folding of the protein primary structure, and the protein tertiary structure is formed by t…
Language ModelingLanguage ModellingPredictionProtein Language Model+2PS4: a Next-Generation Dataset for Protein Single Sequence Secondary Structure Prediction
Protein secondary structure prediction is a subproblem of protein folding. A lightweight algorithm capable of accurately predicting secondary structure from only the protein residue sequence could therefore provide a use…
PredictionProtein FoldingProtein Secondary Structure Prediction