@article{td3btransitiondirecteddiscretediffusionf, title = {TD3B: Transition-Directed Discrete Diffusion for Allosteric Binder Generation}, author = {Hanqun Cao and Aastha Pal and Sophia Tang and Yinuo Zhang and Jingjie Zhang and Pheng Ann Heng and Pranam Chatterjee}, year = {2026}, eprint = {2605.09810}, archivePrefix = {arXiv}, url = {https://arxiv.org/abs/2605.09810}, }