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Fine-tuning BERT for Joint Entity and Relation Extraction in Chinese Medical Text

2019-08-21 · Kui Xue, Yangming Zhou, Zhiyuan Ma, Tong Ruan, Huanhuan Zhang, Ping He

Entity and relation extraction is the necessary step in structuring medical text. However, the feature extraction ability of the bidirectional long short term memory network in the existing model does not achieve the best effect. At the same time, the language model has achieved excellent results in more and more natural language processing tasks. In this paper, we present a focused attention model for the joint entity and relation extraction task. Our model integrates well-known BERT language model into joint learning through dynamic range attention mechanism, thus improving the feature representation ability of shared parameter layer. Experimental results on coronary angiography texts collected from Shuguang Hospital show that the F1-score of named entity recognition and relation classification tasks reach 96.89% and 88.51%, which are better than state-of-the-art methods 1.65% and 1.22%, respectively.

📄 PDF Abstract BibTeX arXiv:1908.07721

Code (1)

genggui001/fine_tuning_bert_for_joint_entity_and_relation_extraction_in_chinese_medical_text tf

Tasks

Joint Entity and Relation ExtractionLanguage ModelingLanguage Modellingnamed-entity-recognitionNamed Entity RecognitionNamed Entity Recognition (NER)RelationRelation ClassificationRelation Extraction

Methods 이 논문이 사용한 방법론

Linear Layer A Linear Layer is a projection $\mathbf{XW + b}$.
Residual Connection 설명 없음
Attention Dropout Attention Dropout is a type of dropout used in attention-based architectures, where elements are randomly dropped out of the…
Linear Warmup With Linear Decay Linear Warmup With Linear Decay is a learning rate schedule in which we increase the learning rate linearly for $n$ updates and then linearly decay afterwards.
Weight Decay 설명 없음
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Dense Connections Dense Connections, or Fully Connected Connections, are a type of layer in a deep neural network that use a linear operation where every input is connected to every output…
Adam 설명 없음

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