paper-with-me

홈 › Papers

A hybrid cellular automaton model of cartilage regeneration capturing the interactions between cellular dynamics and scaffold porosity

2018-08-29

To accelerate the development of strategies for cartilage tissue engineering, models are necessary to study the interactions between cellular dynamics and scaffold (SC) porosity. In experiments, cells are seeded in a porous SC where over a month, the SC slowly degrades while cells divide and synthesize extracellular matrix (ECM) constituents. We use an off-lattice cellular automaton framework to model the individual behavior of cells within the SC. The movement of cells and the ability to reproduce is determined by the nutrient profile and local porosity. A phenomenological approach is used to capture a continuous profile for SC and ECM evolution, which will then change the local porosity. We parameterize the model by matching total cell counts to chondrocytes seeded in a polyglycolic acid SC. We investigate the total cell count and location of various cell populations for different initial SC porosities. Similar to experiments, we observe cell counts that level off around day 15 with higher values in SCs of lower initial porosity. Cell clustering is observed in regions at the edge of the construct that are close to the nutrient-rich medium in the fluid bath. Model results show that a bias in motion due to sensitivity to porosity allows cells to move in a more optimal arrangement. We investigate the distribution of cells as the cell reproduction rate, cell movement distance, and sensitivity to porosity is varied. We observe non monotonic changes in total cell counts within different regions of the construct due to the interplay between porosity and cellular movement. We also analyze the emergent average cell speed for different initial SC porosities, observing an higher average for the lowest initial SC porosity. This model provides a framework to further investigate how changes in biological parameters can change the cellular count and distribution in SCs of different initial porosity

📄 PDF Abstract BibTeX arXiv:1808.10752

Code (0)

등록된 구현이 없습니다.

Tasks

Sensitivity

Similar Papers 제목 키워드 기반

Targeting of chondrocyte plasticity via connexin43 modulation attenuates cellular senescence and fosters a pro-regenerative environment in osteoarthritis

2024-02-01 · Marta Varela-Eirin, Adrian Varela-Vazquez, Amanda Guitian-Caamano, Carlos Luis Paino 외

Osteoarthritis (OA), a chronic disease characterized by articular cartilage degeneration, is a leading cause of disability and pain worldwide. In OA, chondrocytes in cartilage undergo phenotypic changes and senescence, r…

Growing 3D Artefacts and Functional Machines with Neural Cellular Automata

2021-03-15 · Shyam Sudhakaran, Djordje Grbic, Siyan Li, Adam Katona 외

Neural Cellular Automata (NCAs) have been proven effective in simulating morphogenetic processes, the continuous construction of complex structures from very few starting cells. Recent developments in NCAs lie in the 2D …

Minecraft

A scalable solver for a stochastic, hybrid cellular automaton model of personalized breast cancer therapy

2021-05-02 · Xiaoran Lai, Håkon A. Taskén, Torgeir Mo, Simon W. Funke 외

Mathematical modeling and simulation is a promising approach to personalized cancer medicine. Yet, the complexity, heterogeneity and multi-scale nature of cancer pose significant computational challenges. Coupling discre…

Reservoir Computing using Cellular Automata

2014-10-01 · Ozgur Yilmaz

We introduce a novel framework of reservoir computing. Cellular automaton is used as the reservoir of dynamical systems. Input is randomly projected onto the initial conditions of automaton cells and nonlinear computatio…

Knee Cartilage Segmentation Using Diffusion-Weighted MRI

2019-12-04 · Alejandra Duarte, Chaitra V. Hegde, Aakash Kaku, Sreyas Mohan 외

The integrity of articular cartilage is a crucial aspect in the early diagnosis of osteoarthritis (OA). Many novel MRI techniques have the potential to assess compositional changes of the cartilage extracellular matrix. …

Segmentation