Labelling Vertebrae with 2D Reformations of Multidetector CT Images: An Adversarial Approach for Incorporating Prior Knowledge of Spine Anatomy
Purpose: To use and test a labelling algorithm that operates on two-dimensional (2D) reformations, rather than three-dimensional (3D) data to locate and identify vertebrae. Methods: We improved the Btrfly Net (described by Sekuboyina et al) that works on sagittal and coronal maximum intensity projections (MIP) and augmented it with two additional components: spine-localization and adversarial a priori-learning. Furthermore, we explored two variants of adversarial training schemes that incorporated the anatomical a priori knowledge into the Btrfly Net. We investigated the superiority of the proposed approach for labelling vertebrae on three datasets: a public benchmarking dataset of 302 CT scans and two in-house datasets with a total of 238 CT scans. We employed Wilcoxon signed-rank test to compute the statistical significance of the improvement in performance observed due to various architectural components in our approach. Results: On the public dataset, our approach using the described Btrfly(pe-eb) network performed on par with current state-of-the-art methods achieving a statistically significant (p < .001) vertebrae identification rate of 88.5+/-0.2 % and localization distances of less than 7-mm. On the in-house datasets that had a higher inter-scan data variability, we obtained an identification rate of 85.1+/-1.2%. Conclusion: An identification performance comparable to existing 3D approaches was achieved when labelling vertebrae on 2D MIPs. The performance was further improved using the proposed adversarial training regime that effectively enforced local spine a priori knowledge during training. Lastly, spine-localization increased the generalizability of our approach by homogenizing the content in the MIPs.
Code (0)
등록된 구현이 없습니다.
Tasks
AnatomyBenchmarkingComputed Tomography (CT)Similar Papers 제목 키워드 기반
Btrfly Net: Vertebrae Labelling with Energy-based Adversarial Learning of Local Spine Prior
Robust localisation and identification of vertebrae is essential for automated spine analysis. The contribution of this work to the task is two-fold: (1) Inspired by the human expert, we hypothesise that a sagittal and c…
VerSe: A Vertebrae Labelling and Segmentation Benchmark for Multi-detector CT Images
Vertebral labelling and segmentation are two fundamental tasks in an automated spine processing pipeline. Reliable and accurate processing of spine images is expected to benefit clinical decision-support systems for diag…
AnatomySegmentationVertebrae Detection and Localization in CT with Two-Stage CNNs and Dense Annotations
We propose a new, two-stage approach to the vertebrae centroid detection and localization problem. The first stage detects where the vertebrae appear in the scan using 3D samples, the second identifies the specific verte…
Panoptic Segmentation and Labelling of Lumbar Spine Vertebrae using Modified Attention Unet
Segmentation and labeling of vertebrae in MRI images of the spine are critical for the diagnosis of illnesses and abnormalities. These steps are indispensable as MRI technology provides detailed information about the tis…
Panoptic SegmentationSegmentationA Computed Tomography Vertebral Segmentation Dataset with Anatomical Variations and Multi-Vendor Scanner Data
With the advent of deep learning algorithms, fully automated radiological image analysis is within reach. In spine imaging, several atlas- and shape-based as well as deep learning segmentation algorithms have been propos…
AnatomyBenchmarkingComputed Tomography (CT)Segmentation