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Beyond Correlation: Towards Causal Large Language Model Agents in Biomedicine

2025-05-22 · Adib Bazgir, Amir Habibdoust Lafmajani, Yuwen Zhang

Large Language Models (LLMs) show promise in biomedicine but lack true causal understanding, relying instead on correlations. This paper envisions causal LLM agents that integrate multimodal data (text, images, genomics, etc.) and perform intervention-based reasoning to infer cause-and-effect. Addressing this requires overcoming key challenges: designing safe, controllable agentic frameworks; developing rigorous benchmarks for causal evaluation; integrating heterogeneous data sources; and synergistically combining LLMs with structured knowledge (KGs) and formal causal inference tools. Such agents could unlock transformative opportunities, including accelerating drug discovery through automated hypothesis generation and simulation, enabling personalized medicine through patient-specific causal models. This research agenda aims to foster interdisciplinary efforts, bridging causal concepts and foundation models to develop reliable AI partners for biomedical progress.

📄 PDF Abstract BibTeX arXiv:2505.16982

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Causal InferenceDrug DiscoveryLanguage ModelingLanguage ModellingLarge Language Model

Methods 이 논문이 사용한 방법론

Causal inference Causal inference is the process of drawing a conclusion about a causal connection based on the conditions of the occurrence of an effect. The main difference between causal…

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