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BioMistral-NLU: Towards More Generalizable Medical Language Understanding through Instruction Tuning

2024-10-24 · Yujuan Velvin Fu, Giridhar Kaushik Ramachandran, Namu Park, Kevin Lybarger, Fei Xia, Ozlem Uzuner, Meliha Yetisgen

Large language models (LLMs) such as ChatGPT are fine-tuned on large and diverse instruction-following corpora, and can generalize to new tasks. However, those instruction-tuned LLMs often perform poorly in specialized medical natural language understanding (NLU) tasks that require domain knowledge, granular text comprehension, and structured data extraction. To bridge the gap, we: (1) propose a unified prompting format for 7 important NLU tasks, % through span extraction and multi-choice question-answering (QA), (2) curate an instruction-tuning dataset, MNLU-Instruct, utilizing diverse existing open-source medical NLU corpora, and (3) develop BioMistral-NLU, a generalizable medical NLU model, through fine-tuning BioMistral on MNLU-Instruct. We evaluate BioMistral-NLU in a zero-shot setting, across 6 important NLU tasks, from two widely adopted medical NLU benchmarks: Biomedical Language Understanding Evaluation (BLUE) and Biomedical Language Understanding and Reasoning Benchmark (BLURB). Our experiments show that our BioMistral-NLU outperforms the original BioMistral, as well as the proprietary LLMs - ChatGPT and GPT-4. Our dataset-agnostic prompting strategy and instruction tuning step over diverse NLU tasks enhance LLMs' generalizability across diverse medical NLU tasks. Our ablation experiments show that instruction-tuning on a wider variety of tasks, even when the total number of training instances remains constant, enhances downstream zero-shot generalization.

📄 PDF Abstract BibTeX arXiv:2410.18955

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Tasks

Instruction FollowingNatural Language UnderstandingQuestion AnsweringReading ComprehensionZero-shot Generalization

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Attention 설명 없음
Dense Connections Dense Connections, or Fully Connected Connections, are a type of layer in a deep neural network that use a linear operation where every input is connected to every output…
Label Smoothing Label Smoothing is a regularization technique that introduces noise for the labels. This accounts for the fact that datasets may have mistakes in them, so maximizing the…
BPE Byte Pair Encoding, or BPE, is a subword segmentation algorithm that encodes rare and unknown words as sequences of subword units. The intuition is that various word…
Layer Normalization Unlike batch normalization, Layer Normalization directly estimates the normalization statistics from the summed inputs…
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Linear Layer A Linear Layer is a projection $\mathbf{XW + b}$.
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