paper-with-me

홈 › Papers

C2P-GCN: Cell-to-Patch Graph Convolutional Network for Colorectal Cancer Grading

2024-03-08 · Sudipta Paul, Bulent Yener, Amanda W. Lund

Graph-based learning approaches, due to their ability to encode tissue/organ structure information, are increasingly favored for grading colorectal cancer histology images. Recent graph-based techniques involve dividing whole slide images (WSIs) into smaller or medium-sized patches, and then building graphs on each patch for direct use in training. This method, however, fails to capture the tissue structure information present in an entire WSI and relies on training from a significantly large dataset of image patches. In this paper, we propose a novel cell-to-patch graph convolutional network (C2P-GCN), which is a two-stage graph formation-based approach. In the first stage, it forms a patch-level graph based on the cell organization on each patch of a WSI. In the second stage, it forms an image-level graph based on a similarity measure between patches of a WSI considering each patch as a node of a graph. This graph representation is then fed into a multi-layer GCN-based classification network. Our approach, through its dual-phase graph construction, effectively gathers local structural details from individual patches and establishes a meaningful connection among all patches across a WSI. As C2P-GCN integrates the structural data of an entire WSI into a single graph, it allows our model to work with significantly fewer training data compared to the latest models for colorectal cancer. Experimental validation of C2P-GCN on two distinct colorectal cancer datasets demonstrates the effectiveness of our method.

📄 PDF Abstract BibTeX arXiv:2403.04962

Code (0)

등록된 구현이 없습니다.

Tasks

graph constructionwhole slide images

Similar Papers 제목 키워드 기반

CGC-Net: Cell Graph Convolutional Network for Grading of Colorectal Cancer Histology Images

2019-09-03 · Yanning Zhou, Simon Graham, Navid Alemi Koohbanani, Muhammad Shaban 외

Colorectal cancer (CRC) grading is typically carried out by assessing the degree of gland formation within histology images. To do this, it is important to consider the overall tissue micro-environment by assessing the c…

Efficient Colon Cancer Grading with Graph Neural Networks

2020-10-02 · Franziska Lippoldt

Dealing with the application of grading colorectal cancer images, this work proposes a 3 step pipeline for prediction of cancer levels from a histopathology image. The overall model performs better compared to other stat…

feature selectionGraph Neural NetworkPosition

Convolutional Neural Network-Based Automatic Classification of Colorectal and Prostate Tumor Biopsies Using Multispectral Imagery: System Development Study

2023-01-30 · Remy Peyret, Duaa alSaeed, Fouad Khelifi, Nadia Al-Ghreimil 외

Colorectal and prostate cancers are the most common types of cancer in men worldwide. To diagnose colorectal and prostate cancer, a pathologist performs a histological analysis on needle biopsy samples. This manual proce…

Cells are Actors: Social Network Analysis with Classical ML for SOTA Histology Image Classification

2021-06-29 · Neda Zamanitajeddin, Mostafa Jahanifar, Nasir Rajpoot

Digitization of histology images and the advent of new computational methods, like deep learning, have helped the automatic grading of colorectal adenocarcinoma cancer (CRA). Present automated CRA grading methods, howeve…

Deep Learningimage-classificationImage Classification

Colorectal Cancer Segmentation using Atrous Convolution and Residual Enhanced UNet

2021-03-16 · Nisarg A. Shah, Divij Gupta, Romil Lodaya, Ujjwal Baid 외

Colorectal cancer is a leading cause of death worldwide. However, early diagnosis dramatically increases the chances of survival, for which it is crucial to identify the tumor in the body. Since its imaging uses high-res…

Segmentation