Lattice-preserving $\mathcal{ALC}$ ontology embeddings with saturation
Generating vector representations (embeddings) of OWL ontologies is a growing task due to its applications in predicting missing facts and knowledge-enhanced learning in fields such as bioinformatics. The underlying semantics of OWL ontologies are expressed using Description Logics (DLs). Initial approaches to generate embeddings relied on constructing a graph out of ontologies, neglecting the semantics of the logic therein. Recent semantic-preserving embedding methods often target lightweight DL languages like $\mathcal{EL}^{++}$, ignoring more expressive information in ontologies. Although some approaches aim to embed more descriptive DLs like $\mathcal{ALC}$, those methods require the existence of individuals, while many real-world ontologies are devoid of them. We propose an ontology embedding method for the $\mathcal{ALC}$ DL language that considers the lattice structure of concept descriptions. We use connections between DL and Category Theory to materialize the lattice structure and embed it using an order-preserving embedding method. We show that our method outperforms state-of-the-art methods in several knowledge base completion tasks. Furthermore, we incoporate saturation procedures that increase the information within the constructed lattices. We make our code and data available at \url{https://github.com/bio-ontology-research-group/catE}.
Code (1)
Tasks
DescriptiveKnowledge Base CompletionOntology EmbeddingMethods 이 논문이 사용한 방법론
Similar Papers 제목 키워드 기반
Enhancing Geometric Ontology Embeddings for $\mathcal{EL}^{++}$ with Negative Sampling and Deductive Closure Filtering
Ontology embeddings map classes, relations, and individuals in ontologies into $\mathbb{R}^n$, and within $\mathbb{R}^n$ similarity between entities can be computed or new axioms inferred. For ontologies in the Descripti…
Ontology EmbeddingDELE: Deductive $\mathcal{EL}^{++} \thinspace $ Embeddings for Knowledge Base Completion
Ontology embeddings map classes, relations, and individuals in ontologies into $\mathbb{R}^n$, and within $\mathbb{R}^n$ similarity between entities can be computed or new axioms inferred. For ontologies in the Descripti…
Knowledge Base CompletionOntology EmbeddingA Journey into Ontology Approximation: From Non-Horn to Horn
We study complete approximations of an ontology formulated in a non-Horn description logic (DL) such as $\mathcal{ALC}$ in a Horn DL such as~$\mathcal{EL}$. We provide concrete approximation schemes that are necessarily …
Fitting Description Logic Ontologies to ABox and Query Examples
We study a fitting problem inspired by ontology-mediated querying: given a collection of positive and negative examples of the form $(\mathcal{A},q)$ with $\mathcal{A}$ an ABox and $q$ a Boolean query, we seek an ontolog…
Combining Semilattices and Semimodules
We describe the canonical weak distributive law $\delta \colon \mathcal S \mathcal P \to \mathcal P \mathcal S$ of the powerset monad $\mathcal P$ over the $S$-left-semimodule monad $\mathcal S$, for a class of semirings…