paper-with-me

홈 › Papers

Estimating the Repertoire Size in Birds using Unsupervised Clustering techniques

2023-03-19 · Joachim Poutaraud

Birds produce multiple types of vocalizations that, together, constitute a vocal repertoire. For some species, the repertoire size is of importance because it informs us about their brain capacity, territory size or social behaviour. Estimating the repertoire size is challenging because it requires large amounts of data which can be difficult to obtain and analyse. From birds vocalizations recordings, songs are extracted and segmented as sequences of syllables before being clustered. Segmenting songs in such a way can be done either by simple enumeration, where one counts unique vocalization types until there are no new types detected, or by specific algorithms permitting reproducible studies. In this paper, we present a specific automatic method to compute a syllable distance measure that allows an unsupervised classification of bird song syllables. The results obtained from the segmenting of the bird songs are evaluated using the Silhouette metric score.

📄 PDF Abstract BibTeX arXiv:2303.10678

Code (1)

joachimpoutaraud/estimating-repertoire-size-in-birds 공식 구현

Tasks

Clustering

Similar Papers 제목 키워드 기반

Hierarchical Behavioral Repertoires with Unsupervised Descriptors

2018-04-19 · Antoine Cully, Yiannis Demiris

Enabling artificial agents to automatically learn complex, versatile and high-performing behaviors is a long-lasting challenge. This paper presents a step in this direction with hierarchical behavioral repertoires that s…

EBIC: an evolutionary-based parallel biclustering algorithm for pattern discover

2018-01-09 · Patryk Orzechowski, Moshe Sipper, Xiuzhen Huang, Jason H. Moore

In this paper a novel biclustering algorithm based on artificial intelligence (AI) is introduced. The method called EBIC aims to detect biologically meaningful, order-preserving patterns in complex data. The proposed alg…

How many different clonotypes do immune repertoires contain?

2019-07-18

Immune repertoires rely on diversity of T-cell and B-cell receptors to protect us against foreign threats. The ability to recognize a wide variety of pathogens is linked to the number of different clonotypes expressed by…

Diversity

Large-scale GPU-based network analysis of the human T-cell receptor repertoire

2021-12-13 · Paul Richter

Understanding the structure of the human T-cell receptor repertoire is a crucial precondition to understand the ability of the immune system to recognize and respond to antigens. T-cells are often compared via the comple…

GPU

Data-Efficient Self-Supervised Algorithms for Fine-Grained Birdsong Analysis

2025-11-15 · Houtan Ghaffari, Lukas Rauch, Paul Devos arxiv

Research in bioacoustics, neuroscience, and linguistics often uses birdsong as a proxy to acquire knowledge across diverse areas. This requires audio models to annotate and parse the birdsong. Developing such models requ…

Self-Supervised LearningOnline ClusteringData Augmentation