paper-with-me

홈 › Papers

Exact hierarchical reductions of dynamical models via linear transformations

2023-01-27 · Alexander Demin, Elizaveta Demitraki, Gleb Pogudin

Dynamical models described by ordinary differential equations (ODEs) are a fundamental tool in the sciences and engineering. Exact reduction aims at producing a lower-dimensional model in which each macro-variable can be directly related to the original variables, and it is thus a natural step towards the model's formal analysis and mechanistic understanding. We present an algorithm which, given a polynomial ODE model, computes a longest possible chain of exact linear reductions of the model such that each reduction refines the previous one, thus giving a user control of the level of detail preserved by the reduction. This significantly generalizes over the existing approaches which compute only the reduction of the lowest dimension subject to an approach-specific constraint. The algorithm reduces finding exact linear reductions to a question about representations of finite-dimensional algebras. We provide an implementation of the algorithm, demonstrate its performance on a set of benchmarks, and illustrate the applicability via case studies. Our implementation is freely available at https://github.com/x3042/ExactODEReduction.jl

📄 PDF Abstract BibTeX arXiv:2301.11653

Code (1)

x3042/exactodereduction.jl 공식 구현

Similar Papers 제목 키워드 기반

On study of transition fronts of Fisher-KPP type reaction-diffusion PDEs by non-linear transformations into exactly solvable class

2024-12-11 · Preet Mishra, Sapna Ratan Shah, R. K. Brojen Singh

Spatio-temporal dynamics of the evolution of population involving growth and diffusion processes can be modeled by class of partial diffusion equations (PDEs) known as reaction-diffusion systems. In this work, we develop…

Interpretable exact linear reductions via positivity

2021-04-29 · Gleb Pogudin, Xingjian Zhang

Kinetic models of biochemical systems used in the modern literature often contain hundreds or even thousands of variables. While these models are convenient for detailed simulations, their size is often an obstacle to de…

A Metaheuristic for Amortized Search in High-Dimensional Parameter Spaces

2023-09-28 · Dominic Boutet, Sylvain Baillet

Parameter inference for dynamical models of (bio)physical systems remains a challenging problem. Intractable gradients, high-dimensional spaces, and non-linear model functions are typically problematic without large comp…

Bayesian Inference

Transform-Based Multilinear Dynamical System for Tensor Time Series Analysis

2018-11-18 · Weijun Lu, Xiao-Yang Liu, Qingwei Wu, Yue Sun 외

We propose a novel multilinear dynamical system (MLDS) in a transform domain, named $\mathcal{L}$-MLDS, to model tensor time series. With transformations applied to a tensor data, the latent multidimensional correlations…

Time SeriesTime Series Analysis

Deep Convolutional Networks are Hierarchical Kernel Machines

2015-08-05 · Fabio Anselmi, Lorenzo Rosasco, Cheston Tan, Tomaso Poggio

In i-theory a typical layer of a hierarchical architecture consists of HW modules pooling the dot products of the inputs to the layer with the transformations of a few templates under a group. Such layers include as spec…