Flexible Bayesian Modelling for Nonlinear Image Registration
We describe a diffeomorphic registration algorithm that allows groups of images to be accurately aligned to a common space, which we intend to incorporate into the SPM software. The idea is to perform inference in a probabilistic graphical model that accounts for variability in both shape and appearance. The resulting framework is general and entirely unsupervised. The model is evaluated at inter-subject registration of 3D human brain scans. Here, the main modeling assumption is that individual anatomies can be generated by deforming a latent 'average' brain. The method is agnostic to imaging modality and can be applied with no prior processing. We evaluate the algorithm using freely available, manually labelled datasets. In this validation we achieve state-of-the-art results, within reasonable runtimes, against previous state-of-the-art widely used, inter-subject registration algorithms. On the unprocessed dataset, the increase in overlap score is over 17%. These results demonstrate the benefits of using informative computational anatomy frameworks for nonlinear registration.
Code (0)
등록된 구현이 없습니다.
Tasks
AnatomyImage RegistrationSimilar Papers 제목 키워드 기반
Bayesian Unsupervised Disentanglement of Anatomy and Geometry for Deep Groupwise Image Registration
This article presents a general Bayesian learning framework for multi-modal groupwise image registration. The method builds on probabilistic modelling of the image generative process, where the underlying common anatomy …
AnatomyBayesian InferenceDisentanglementImage RegistrationUncertainty quantification in non-rigid image registration via stochastic gradient Markov chain Monte Carlo
We develop a new Bayesian model for non-rigid registration of three-dimensional medical images, with a focus on uncertainty quantification. Probabilistic registration of large images with calibrated uncertainty estimates…
Image RegistrationUncertainty QuantificationVariational InferenceRobust, fast and accurate: a 3-step method for automatic histological image registration
We present a 3-step registration pipeline for differently stained histological serial sections that consists of 1) a robust pre-alignment, 2) a parametric registration computed on coarse resolution images, and 3) an accu…
Image RegistrationJoint registration and synthesis using a probabilistic model for alignment of MRI and histological sections
Nonlinear registration of 2D histological sections with corresponding slices of MRI data is a critical step of 3D histology reconstruction. This task is difficult due to the large differences in image contrast and resolu…
Bayesian InferenceCardioMorphNet: Cardiac Motion Prediction Using a Shape-Guided Bayesian Recurrent Deep Network
Accurate cardiac motion estimation from cine cardiac magnetic resonance (CMR) images is vital for assessing cardiac function and detecting its abnormalities. Existing methods often struggle to accurately capture heart mo…
Image Registration