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Investigating Large Language Models and Control Mechanisms to Improve Text Readability of Biomedical Abstracts

2023-09-22 · Zihao Li, Samuel Belkadi, Nicolo Micheletti, Lifeng Han, Matthew Shardlow, Goran Nenadic

Biomedical literature often uses complex language and inaccessible professional terminologies. That is why simplification plays an important role in improving public health literacy. Applying Natural Language Processing (NLP) models to automate such tasks allows for quick and direct accessibility for lay readers. In this work, we investigate the ability of state-of-the-art large language models (LLMs) on the task of biomedical abstract simplification, using the publicly available dataset for plain language adaptation of biomedical abstracts (\textbf{PLABA}). The methods applied include domain fine-tuning and prompt-based learning (PBL) on: 1) Encoder-decoder models (T5, SciFive, and BART), 2) Decoder-only GPT models (GPT-3.5 and GPT-4) from OpenAI and BioGPT, and 3) Control-token mechanisms on BART-based models. We used a range of automatic evaluation metrics, including BLEU, ROUGE, SARI, and BERTscore, and also conducted human evaluations. BART-Large with Control Token (BART-L-w-CT) mechanisms reported the highest SARI score of 46.54 and T5-base reported the highest BERTscore 72.62. In human evaluation, BART-L-w-CTs achieved a better simplicity score over T5-Base (2.9 vs. 2.2), while T5-Base achieved a better meaning preservation score over BART-L-w-CTs (3.1 vs. 2.6). We also categorised the system outputs with examples, hoping this will shed some light for future research on this task. Our code, fine-tuned models, and data splits are available at \url{https://github.com/HECTA-UoM/PLABA-MU} \begin{IEEEkeywords} Large Language Models, Text Simplification, Biomedical NLP, Control Mechanisms, Health Informatics \end{IEEEkeywords}

📄 PDF Abstract BibTeX arXiv:2309.13202

Code (1)

hecta-uom/plaba-mu 공식 구현

Tasks

DecoderText Simplification

Methods 이 논문이 사용한 방법론

Multi-Head Attention 설명 없음
Attention 설명 없음
Cosine Annealing Cosine Annealing is a type of learning rate schedule that has the effect of starting with a large learning rate that is relatively rapidly decreased to a minimum value before…
Linear Warmup With Cosine Annealing Linear Warmup With Cosine Annealing is a learning rate schedule where we increase the learning rate linearly for $n$ updates and then anneal according to a cosine schedule…
Linear Layer A Linear Layer is a projection $\mathbf{XW + b}$.
Softmax The Softmax output function transforms a previous layer's output into a vector of probabilities. It is commonly used for multiclass classification. Given an input vector $x$…
Discriminative Fine-Tuning Discriminative Fine-Tuning is a fine-tuning strategy that is used for ULMFiT type models. Instead of using the same learning rate…
Residual Connection 설명 없음

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