paper-with-me

Papers

Prediction and Modularity in Dynamical Systems

2011-06-19 · Artemy Kolchinsky, Luis M. Rocha

Identifying and understanding modular organizations is centrally important in the study of complex systems. Several approaches to this problem have been advanced, many framed in information-theoretic terms. Our treatment starts from the complementary point of view of statistical modeling and prediction of dynamical systems. It is known that for finite amounts of training data, simpler models can have greater predictive power than more complex ones. We use the trade-off between model simplicity and predictive accuracy to generate optimal multiscale decompositions of dynamical networks into weakly-coupled, simple modules. State-dependent and causal versions of our method are also proposed.

📄 PDF Abstract BibTeX arXiv:1106.3703

Code (0)

등록된 구현이 없습니다.

Tasks

Prediction

Similar Papers 제목 키워드 기반

ModLaNets: Learning Generalisable Dynamics via Modularity and Physical Inductive Bias

2022-06-24 · Yupu Lu, ShiJie Lin, Guanqi Chen, Jia Pan

Deep learning models are able to approximate one specific dynamical system but struggle at learning generalisable dynamics, where dynamical systems obey the same laws of physics but contain different numbers of elements …

Inductive Bias

A Model of Gene Expression Based on Random Dynamical Systems Reveals Modularity Properties of Gene Regulatory Networks

2016-03-20

Here we propose a new approach to modeling gene expression based on the theory of random dynamical systems (RDS) that provides a general coupling prescription between the nodes of any given regulatory network given the d…

Evolutionary Optimization Reveals Structural Constraints on Reservoir Architecture for Spatiotemporal Chaos

2026-06-22 · Nima Dehghani arxiv

Biological systems maintain function in fluctuating environments by transforming past stimulation into internal dynamical states that support future-oriented responses. Reservoir computing provides a computational analog…

Dynamical Modularity in Automata Models of Biochemical Networks

2023-03-29 · Thomas Parmer, Luis M. Rocha

Given the large size and complexity of most biochemical regulation and signaling networks, there is a non-trivial relationship between the micro-level logic of component interactions and the observed macro-dynamics. Here…

Noisy dynamical systems evolve error correcting codes and modularity

2023-03-25 · Trevor McCourt, Ila R. Fiete, Isaac L. Chuang

Noise is a ubiquitous feature of the physical world. As a result, the first prerequisite of life is fault tolerance: maintaining integrity of state despite external bombardment. Recent experimental advances have revealed…