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PRISM2: Unlocking Multi-Modal General Pathology AI with Clinical Dialogue

2025-06-16 · George Shaikovski, Eugene Vorontsov, Adam Casson, Julian Viret, Eric Zimmermann, Neil Tenenholtz, Yi Kan Wang, Jan H. Bernhard, Ran A. Godrich, Juan A. Retamero, Razik Yousfi, Nicolo Fusi, Thomas J. Fuchs, Kristen Severson, SiQi Liu

Recent pathology foundation models can provide rich tile-level representations but fall short of delivering general-purpose clinical utility without further extensive model development. These models lack whole-slide image (WSI) understanding and are not trained with large-scale diagnostic data, limiting their performance on diverse downstream tasks. We introduce PRISM2, a multi-modal slide-level foundation model trained via clinical dialogue to enable scalable, generalizable pathology AI. PRISM2 is trained on nearly 700,000 specimens (2.3 million WSIs) paired with real-world clinical diagnostic reports in a two-stage process. In Stage 1, a vision-language model is trained using contrastive and captioning objectives to align whole slide embeddings with textual clinical diagnosis. In Stage 2, the language model is unfrozen to enable diagnostic conversation and extract more clinically meaningful representations from hidden states. PRISM2 achieves strong performance on diagnostic and biomarker prediction tasks, outperforming prior slide-level models including PRISM and TITAN. It also introduces a zero-shot yes/no classification approach that surpasses CLIP-style methods without prompt tuning or class enumeration. By aligning visual features with clinical reasoning, PRISM2 improves generalization on both data-rich and low-sample tasks, offering a scalable path forward for building general pathology AI agents capable of assisting diagnostic and prognostic decisions.

📄 PDF Abstract BibTeX arXiv:2506.13063

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DiagnosticLanguage ModelingLanguage Modelling

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ALIGN In the ALIGN method, visual and language representations are jointly trained from noisy image alt-text data. The image and text encoders are learned via contrastive loss…

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