paper-with-me

홈 › Papers

Punctuated equilibrium as the default mode of evolution of large populations on fitness landscapes dominated by saddle points in the weak-mutation limit

2020-07-20

Punctuated equilibrium is a mode of evolution in which phenetic change occurs in rapid bursts that are separated by much longer intervals of stasis during which mutations accumulate but no major phenotypic change occurs. Punctuated equilibrium has been originally proposed within the framework of paleobiology, to explain the lack of transitional forms that is typical of the fossil record. Theoretically, punctuated equilibrium has been linked to self-organized criticality (SOC), a model in which the size of avalanches in an evolving system is power-law distributed, resulting in increasing rarity of major events. We show here that, under the weak-mutation limit, a large population would spend most of the time in stasis in the vicinity of saddle points in the fitness landscape. The periods of stasis are punctuated by fast transitions, in lnNe time (Ne, effective population size), when a new beneficial mutation is fixed in the evolving population, which moves to a different saddle, or on much rarer occasions, from a saddle to a local peak. Thus, punctuated equilibrium is the default mode of evolution under a simple model that does not involve SOC or other special conditions.

📄 PDF Abstract BibTeX arXiv:2007.10228

Code (0)

등록된 구현이 없습니다.

Similar Papers 제목 키워드 기반

Multi-scale phylodynamic modelling of rapid punctuated pathogen evolution

2024-12-05 · Quang Dang Nguyen, Sheryl L. Chang, Carl J. E. Suster, Rebecca J. Rockett 외

Computational multi-scale pandemic modelling remains a major and timely challenge. Here we identify specific requirements for a new class of pandemic models operating across three scales: (1) rapid pathogen evolution, pu…

Thermodynamics and evolutionary biology through optimal control

2018-04-10

We consider a particular instance of the lift of controlled systems recently proposed in the theory of irreversible thermodynamics and show that it leads to a variational principle for an optimal control in the sense of …

An energy-based natural selection model

2020-11-13 · N. Abadi, G. Abramson

Genetic information and environmental factors determine the path of an individuals life and therefore, the evolution of its entire species. We have succeeded in proposing and studying a model that captures this idea. In …

model

Evolutionary ecology of words

2025-05-09 · Reiji Suzuki, Takaya Arita

We propose a model for the evolutionary ecology of words as one attempt to extend evolutionary game theory and agent-based models by utilizing the rich linguistic expressions of Large Language Models (LLMs). Our model en…

Simulating short- and long-term evolutionary dynamics on rugged landscapes

2021-05-12 · Leonardo Trujillo, Paul Banse, Guillaume Beslon

We propose a minimal model to simulate long waiting times followed by evolutionary bursts on rugged landscapes. It combines point and inversions-like mutations as sources of genetic variation. The inversions are intended…