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Trusted Multi-Scale Classification Framework for Whole Slide Image

2022-07-12 · Ming Feng, Kele Xu, Nanhui Wu, Weiquan Huang, Yan Bai, Changjian Wang, Huaimin Wang

Despite remarkable efforts been made, the classification of gigapixels whole-slide image (WSI) is severely restrained from either the constrained computing resources for the whole slides, or limited utilizing of the knowledge from different scales. Moreover, most of the previous attempts lacked of the ability of uncertainty estimation. Generally, the pathologists often jointly analyze WSI from the different magnifications. If the pathologists are uncertain by using single magnification, then they will change the magnification repeatedly to discover various features of the tissues. Motivated by the diagnose process of the pathologists, in this paper, we propose a trusted multi-scale classification framework for the WSI. Leveraging the Vision Transformer as the backbone for multi branches, our framework can jointly classification modeling, estimating the uncertainty of each magnification of a microscope and integrate the evidence from different magnification. Moreover, to exploit discriminative patches from WSIs and reduce the requirement for computation resources, we propose a novel patch selection schema using attention rollout and non-maximum suppression. To empirically investigate the effectiveness of our approach, empirical experiments are conducted on our WSI classification tasks, using two benchmark databases. The obtained results suggest that the trusted framework can significantly improve the WSI classification performance compared with the state-of-the-art methods.

📄 PDF Abstract BibTeX arXiv:2207.05290

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Multi-Head Attention 설명 없음
Attention 설명 없음
Linear Layer A Linear Layer is a projection $\mathbf{XW + b}$.
Softmax The Softmax output function transforms a previous layer's output into a vector of probabilities. It is commonly used for multiclass classification. Given an input vector $x$…
Absolute Position Encodings Absolute Position Encodings are a type of position embeddings for [Transformer-based models] where positional encodings are…
Dropout Dropout is a regularization technique for neural networks that drops a unit (along with connections) at training time with a specified probability $p$ (a common value is…
BPE Byte Pair Encoding, or BPE, is a subword segmentation algorithm that encodes rare and unknown words as sequences of subword units. The intuition is that various word…
Position-Wise Feed-Forward Layer 설명 없음

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