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Papers Graph Generation

“Graph Generation” 태그가 달린 논문 831편 · 필터 해제

BLINKG: A Benchmark for LLM-Integrated Knowledge Graph Generation

2026-05-19 · Carla Castedo, Enrique Iglesias, Manuel Lama, Alberto Bugarin-Diz 외 arxiv

Generating Knowledge Graphs (KGs) remains one of the most time-consuming and labor-intensive tasks for knowledge engineers, as they need to identify semantic equivalences between input data sources and ontology terms. Wh…

Graph GenerationKnowledge Graphs

PlantPose: Universal Plant Skeleton Estimation via Tree-constrained Graph Generation

2026-05-18 · Xinpeng Liu, Hiroaki Santo, Yosuke Toda, Fumio Okura arxiv

Accurate estimation of plant skeletal structures (e.g., branching structures) from images is essential for smart agriculture and plant science. Unlike human skeletons with fixed topology, plant skeleton estimation presen…

Graph Generation

Controllable Molecular Generative Foundation Models

2026-05-14 · Yihan Zhu, Yuhan Liu, Weijiang Li, Tengfei Luo 외 arxiv

Despite the success of foundation models in language and vision, molecular graph generation still lacks a unified framework for heterogeneous design tasks with reliable controllability. While reinforcement learning (RL) …

Reinforcement LearningGraph GenerationDrug Discovery

Fine-Grained Graph Generation through Latent Mixture Scheduling

2026-05-04 · Nidhi Vakil, Hadi Amiri arxiv

Structure aware graph generation aims to generate graphs that satisfy given topological properties. It has applications in domains such as drug discovery, social network modeling, and knowledge graph construction. Unlike…

Graph GenerationDrug Discovery

Information-geometric adaptive sampling for graph diffusion

2026-04-30 · Yuhui Lu, Wenjing Liu, Kun Zhan arxiv

Standard diffusion models for graph generation typically rely on uniform time-stepping, an approach that overlooks the non-homogeneous dynamics of distributional evolution on complex manifolds. In this paper, we present …

Graph Generation

Learning Posterior Predictive Distributions for Node Classification from Synthetic Graph Priors

2026-04-21 · Jeongwhan Choi, Jongwoo Kim, Woosung Kang, Noseong Park arxiv

One of the most challenging problems in graph machine learning is generalizing across graphs with diverse properties. Graph neural networks (GNNs) face a fundamental limitation: they require separate training for each ne…

Node ClassificationGraph GenerationGraph Learning

One Pass for All: A Discrete Diffusion Model for Knowledge Graph Triple Set Prediction

2026-04-20 · Jihong Guan, Jiaqi Wang, Wengen Li, Hanchen Yang 외 arxiv

Knowledge Graphs (KGs) are composed of triples, and the goal of Knowledge Graph Completion (KGC) is to infer the missing factual triples. Traditional KGC tasks predict missing elements in a triple given one or two of its…

Knowledge Graph CompletionGraph GenerationKnowledge Graphs

Interpolating Discrete Diffusion Models with Controllable Resampling

2026-04-19 · Marcel Kollovieh, Sirine Ayadi, Stephan Günnemann arxiv

Discrete diffusion models form a powerful class of generative models across diverse domains, including text and graphs. However, existing approaches face fundamental limitations. Masked diffusion models suffer from irrev…

Graph GenerationText Generation

Prism: Symbolic Superoptimization of Tensor Programs

2026-04-16 · Mengdi Wu, Xiaoyu Jiang, Oded Padon, Zhihao Jia arxiv

This paper presents Prism, the first symbolic superoptimizer for tensor programs. The key idea is sGraph, a symbolic, hierarchical representation that compactly encodes large classes of tensor programs by symbolically re…

Graph Generation

Equivariant Efficient Joint Discrete and Continuous MeanFlow for Molecular Graph Generation

2026-04-09 · Rongjian Xu, Teng Pang, Zhiqiang Dong, Guoqiang Wu arxiv

Graph-structured data jointly contain discrete topology and continuous geometry, which poses fundamental challenges for generative modeling due to heterogeneous distributions, incompatible noise dynamics, and the need fo…

Graph Generation

Beyond Predefined Schemas: TRACE-KG for Context-Enriched Knowledge Graph Generation

2026-04-03 · Mohammad Sadeq Abolhasani, Yang Ba, Yixuan He, Rong Pan arxiv

Knowledge graph generation typically relies either on predefined ontologies or on schema-free extraction. Ontology-driven pipelines enforce consistent typing but require costly schema design and maintenance, whereas sche…

Graph GenerationKnowledge Graphs

Guideline2Graph: Profile-Aware Multimodal Parsing for Executable Clinical Decision Graphs

2026-04-02 · Onur Selim Kilic, Yeti Z. Gurbuz, Cem O. Yaldiz, Afra Nawar 외 arxiv

Clinical practice guidelines are long, multimodal documents whose branching recommendations are difficult to convert into executable clinical decision support (CDS), and one-shot parsing often breaks cross-page continuit…

Graph Generation

Hierarchical Discrete Flow Matching for Graph Generation

2026-03-31 · Yoann Boget, Pablo Strasser, Alexandros Kalousis arxiv

Denoising-based models, including diffusion and flow matching, have led to substantial advances in graph generation. Despite this progress, such models remain constrained by two fundamental limitations: a computational c…

Graph Generation

Unrestrained Simplex Denoising for Discrete Data. A Non-Markovian Approach Applied to Graph Generation

2026-03-30 · Yoann Boget, Alexandros Kalousis arxiv

Denoising models such as Diffusion or Flow Matching have recently advanced generative modeling for discrete structures, yet most approaches either operate directly in the discrete state space, causing abrupt state change…

Graph Generation

Hierarchy-Guided Topology Latent Flow for Molecular Graph Generation

2026-03-28 · Urvi Awasthi, Alexander Arjun Lobo, Leonid Zhukov arxiv

Generating chemically valid 3D molecules is hindered by discrete bond topology: small local bond errors can cause global failures (valence violations, disconnections, implausible rings), especially for drug-like molecule…

Graph Generation

Reservoir-Based Graph Convolutional Networks

2026-03-25 · Mayssa Soussia, Gita Ayu Salsabila, Mohamed Ali Mahjoub, Islem Rekik arxiv

Message passing is a core mechanism in Graph Neural Networks (GNNs), enabling the iterative update of node embeddings by aggregating information from neighboring nodes. Graph Convolutional Networks (GCNs) exemplify this …

Graph ClassificationGraph Generation

HGNet: Scalable Foundation Model for Automated Knowledge Graph Generation from Scientific Literature

2026-03-24 · Devvrat Joshi, Islem Rekik arxiv

Automated knowledge graph (KG) construction is essential for navigating the rapidly expanding body of scientific literature. However, existing approaches struggle to recognize long multi-word entities, often fail to gene…

Relation ExtractionGraph Generation

Graph Energy Matching: Transport-Aligned Energy-Based Modeling for Graph Generation

2026-03-24 · Michal Balcerak, Suprosanna Shit, Chinmay Prabhakar, Sebastian Kaltenbach 외 arxiv

Generative modeling of discrete data, such as graphs, underpins many scientific and industrial applications, including molecular discovery and materials design. In these domains, probabilistic inference is particularly v…

Graph Generation

FlowMS: Flow Matching for De Novo Structure Elucidation from Mass Spectra

2026-03-19 · Jianan Nie, Peng Gao arxiv

Mass spectrometry (MS) stands as a cornerstone analytical technique for molecular identification, yet de novo structure elucidation from spectra remains challenging due to the combinatorial complexity of chemical space a…

Graph Generation

Generative AI for Quantum Circuits and Quantum Code: A Technical Review and Taxonomy

2026-03-17 · Juhani Merilehto arxiv

We review thirteen generative systems and five supporting datasets for quantum circuit and quantum code generation, identified through a structured scoping review of Hugging Face, arXiv, and provenance tracing (January-F…

Graph GenerationCode Generation
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