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Papers de novo peptide sequencing

“de novo peptide sequencing” 태그가 달린 논문 24편 · 필터 해제

DeepNovoV2: Better de novo peptide sequencing with deep learning

2019-04-17 · Rui Qiao, Ngoc Hieu Tran, Lei Xin, Baozhen Shan 외

Personalized cancer vaccines are envisioned as the next generation rational cancer immunotherapy. The key step in developing personalized therapeutic cancer vaccines is to identify tumor-specific neoantigens that are on …

Deep Learningde novo peptide sequencing

Deep learning enables de novo peptide sequencing from data-independent-acquisition mass spectrometry

2018-12-20 · Nature Methods 2018 12 · Ngoc Hieu Tran, Rui Qiao, Lei Xin, Xin Chen 외

We present DeepNovo-DIA, a de novo peptide-sequencing method for data-independent acquisition (DIA) mass spectrometry data. We use neural networks to capture precursor and fragment ions across m/z, retention-time, and in…

de novo peptide sequencing

Protein identification with deep learning: from abc to xyz

2017-10-08 · Ngoc Hieu Tran, Zachariah Levine, Lei Xin, Baozhen Shan 외

Proteins are the main workhorses of biological functions in a cell, a tissue, or an organism. Identification and quantification of proteins in a given sample, e.g. a cell type under normal/disease conditions, are fundame…

Deep Learningde novo peptide sequencing

De novo peptide sequencing by deep learning

2017-07-18 · PNAS 2017 7 · Ngoc Hieu Tran, Xianglilan Zhang, Lei Xin, Baozhen Shan 외

Significance Our method, DeepNovo, introduces deep learning to de novo peptide sequencing from tandem MS data, the key technology for protein characterization in proteomics research. DeepNovo achieves major improvement …

Deep Learningde novo peptide sequencing
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