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Papers Medical Concept Normalization

“Medical Concept Normalization” 태그가 달린 논문 13편 · 필터 해제

Medical Concept Normalization in a Low-Resource Setting

2024-09-06 · Tim Patzelt

In the field of biomedical natural language processing, medical concept normalization is a crucial task for accurately mapping mentions of concepts to a large knowledge base. However, this task becomes even more challeng…

Medical Concept Normalization

preon: Fast and accurate entity normalization for drug names and cancer types in precision oncology

2024-03-01 · Bioinformatics 2024 3 · Arik Ermshaus, Michael Piechotta, Gina Rüter, Ulrich Keilholz 외

Motivation In precision oncology (PO), clinicians aim to find the best treatment for any patient based on their molecular characterization. A major bottleneck is the manual annotation and evaluation of individual varian…

Data IntegrationMedical Concept NormalizationTerm Extraction

CBLUE: A Chinese Biomedical Language Understanding Evaluation Benchmark

2021-06-15 · ACL 2022 5 · Ningyu Zhang, Mosha Chen, Zhen Bi, Xiaozhuan Liang 외

Artificial Intelligence (AI), along with the recent progress in biomedical language understanding, is gradually changing medical practice. With the development of biomedical language understanding benchmarks, AI applicat…

Intent ClassificationMedical Concept NormalizationMedical Relation ExtractionNamed Entity Recognition+6

C-Norm: a neural approach to few-shot entity normalization

2020-12-29 · BMC Bioinformatics 2020 12 · Arnaud Ferré, Louise Deléger, Robert Bossy, Pierre Zweigenbaum 외

Entity normalization is an important information extraction task which has gained renewed attention in the last decade, particularly in the biomedical and life science domains. In these domains, and more generally in all…

Few-Shot LearningMedical Concept Normalization

Social Media Medical Concept Normalization using RoBERTa in Ontology Enriched Text Similarity Framework

2020-12-01 · AACL (knlp) 2020 12 · Katikapalli Subramanyam Kalyan, Sivanesan Sangeetha

Pattisapu et al. (2020) formulate medical concept normalization (MCN) as text similarity problem and propose a model based on RoBERTa and graph embedding based target concept vectors. However, graph embedding techniques …

AttributeGraph EmbeddingMedical Concept Normalizationtext similarity

Target Concept Guided Medical Concept Normalization in Noisy User-Generated Texts

2020-11-01 · EMNLP (DeeLIO) 2020 11 · Katikapalli Subramanyam Kalyan, Sivanesan Sangeetha

Medical concept normalization (MCN) i.e., mapping of colloquial medical phrases to standard concepts is an essential step in analysis of medical social media text. The main drawback in existing state-of-the-art approach …

Medical Concept NormalizationSentenceSentence EmbeddingSentence-Embedding

Medical Concept Normalization in User-Generated Texts by Learning Target Concept Embeddings

2020-11-01 · EMNLP (Louhi) 2020 11 · Katikapalli Subramanyam Kalyan, Sivanesan Sangeetha

Medical concept normalization helps in discovering standard concepts in free-form text i.e., maps health-related mentions to standard concepts in a clinical knowledge base. It is much beyond simple string matching and re…

Clinical KnowledgeMedical Concept Normalizationtext-classificationText Classification+1

Medical Concept Normalization in User Generated Texts by Learning Target Concept Embeddings

2020-06-07 · Katikapalli Subramanyam Kalyan, S. Sangeetha

Medical concept normalization helps in discovering standard concepts in free-form text i.e., maps health-related mentions to standard concepts in a vocabulary. It is much beyond simple string matching and requires a deep…

General ClassificationMedical Concept Normalizationtext-classificationText Classification+1

An ensemble CNN method for biomedical entity normalization

2019-11-01 · WS 2019 11 · Pan Deng, Haipeng Chen, Mengyao Huang, Xiaowen Ruan 외

Different representations of the same concept could often be seen in scientific reports and publications. Entity normalization (or entity linking) is the task to match the different representations to their standard conc…

Entity LinkingMedical Concept Normalization

BOUN-ISIK Participation: An Unsupervised Approach for the Named Entity Normalization and Relation Extraction of Bacteria Biotopes

2019-11-01 · WS 2019 11 · {\.I}lknur Karadeniz, {\"O}mer Faruk Tuna, Arzucan {\"O}zg{\"u}r

This paper presents our participation to the Bacteria Biotope Task of the BioNLP Shared Task 2019. Our participation includes two systems for the two subtasks of the Bacteria Biotope Task: the normalization of entities (…

Medical Concept NormalizationRelation ExtractionRe-RankingWord Embeddings

Integration of Deep Learning and Traditional Machine Learning for Knowledge Extraction from Biomedical Literature

2019-11-01 · WS 2019 11 · Jihang Mao, Wanli Liu

In this paper, we present our participation in the Bacteria Biotope (BB) task at BioNLP-OST 2019. Our system utilizes fine-tuned language representation models and machine learning approaches based on word embedding and …

BIG-bench Machine LearningMedical Concept NormalizationRelationRelation Extraction

Deep Neural Models for Medical Concept Normalization in User-Generated Texts

2019-07-18 · ACL 2019 7 · Zulfat Miftahutdinov, Elena Tutubalina

In this work, we consider the medical concept normalization problem, i.e., the problem of mapping a health-related entity mention in a free-form text to a concept in a controlled vocabulary, usually to the standard thesa…

FormMedical Concept Normalization

Sequence Learning with RNNs for Medical Concept Normalization in User-Generated Texts

2018-11-28 · Elena Tutubalina, Zulfat Miftahutdinov, Sergey Nikolenko, Valentin Malykh

In this work, we consider the medical concept normalization problem, i.e., the problem of mapping a disease mention in free-form text to a concept in a controlled vocabulary, usually to the standard thesaurus in the Unif…

Medical Concept NormalizationSemantic SimilaritySemantic Textual Similarity
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