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Papers Protein Interface Prediction

“Protein Interface Prediction” 태그가 달린 논문 7편 · 필터 해제

Integration of Pre-trained Protein Language Models into Geometric Deep Learning Networks

2022-12-07 · Fang Wu, Lirong Wu, Dragomir Radev, Jinbo Xu 외

Geometric deep learning has recently achieved great success in non-Euclidean domains, and learning on 3D structures of large biomolecules is emerging as a distinct research area. However, its efficacy is largely constrai…

Protein Interface PredictionRepresentation Learning

DIPS-Plus: The Enhanced Database of Interacting Protein Structures for Interface Prediction

2021-06-06 · Alex Morehead, Chen Chen, Ada Sedova, Jianlin Cheng

How and where proteins interface with one another can ultimately impact the proteins' functions along with a range of other biological processes. As such, precise computational methods for protein interface prediction (P…

Drug DiscoveryProtein Interface Prediction

Deep Learning of High-Order Interactions for Protein Interface Prediction

2020-07-18 · Yi Liu, Hao Yuan, Lei Cai, Shuiwang Ji

Protein interactions are important in a broad range of biological processes. Traditionally, computational methods have been developed to automatically predict protein interface from hand-crafted features. Recent approach…

Deep LearningPredictionProtein Interface PredictionVocal Bursts Intensity Prediction

A Multiscale Graph Convolutional Network Using Hierarchical Clustering

2020-06-22 · Alex Lipov, Pietro Liò

The information contained in hierarchical topology, intrinsic to many networks, is currently underutilised. A novel architecture is explored which exploits this information through a multiscale decomposition. A dendrogra…

ClusteringMolecular Property PredictionPredictionProperty Prediction+1

Transferrable End-to-End Learning for Protein Interface Prediction

2018-09-27 · Raphael J. L. Townshend, Rishi Bedi, Ron O. Dror

While there has been an explosion in the number of experimentally determined, atomically detailed structures of proteins, how to represent these structures in a machine learning context remains an open research question.…

Protein Interface PredictionTransfer Learning

End-to-End Learning on 3D Protein Structure for Interface Prediction

2018-07-03 · NeurIPS 2019 12 · Raphael J. L. Townshend, Rishi Bedi, Patricia A. Suriana, Ron O. Dror

Despite an explosion in the number of experimentally determined, atomically detailed structures of biomolecules, many critical tasks in structural biology remain data-limited. Whether performance in such tasks can be imp…

Open-Ended Question AnsweringProtein Interface PredictionTransfer Learning

Protein Interface Prediction using Graph Convolutional Networks

2017-12-01 · NeurIPS 2017 12 · Alex Fout, Jonathon Byrd, Basir Shariat, Asa Ben-Hur

We consider the prediction of interfaces between proteins, a challenging problem with important applications in drug discovery and design, and examine the performance of existing and newly proposed spatial graph convolut…

Drug DiscoveryPredictionProtein Interface Prediction
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