paper-with-me

Papers

A phase-field model for active contractile surfaces

2023-06-29 · Sebastian Aland, Claudia Wohlgemuth

The morphogenesis of cells and tissues involves an interplay between chemical signals and active forces on their surrounding surface layers. The complex interaction of hydrodynamics and material flows on such active surfaces leads to pattern formation and shape dynamics which can involve topological transitions, for example during cell division. To better understand such processes requires novel numerical tools. Here, we present a phase-field model for an active deformable surface interacting with the surrounding fluids. The model couples hydrodynamics in the bulk to viscous flow along the diffuse surface, driven by active contraction of a surface species. As a new feature in phase-field modeling, we include the viscosity of a diffuse interface and stabilize the interface profile in the Stokes-Cahn-Hilliard equation by an auxiliary advection velocity, which is constant normal to the interface. The method is numerically validated with previous results based on linear stability analysis. Further, we highlight some distinct features of the new method, like the avoidance of re-meshing and the inclusion of contact mechanics, as we simulate the self-organized polarization and migration of a cell through a narrow channel. Finally, we study the formation of a contractile ring on the surface and illustrate the capability of the method to resolve topological transitions by a first simulation of a full cell division.

📄 PDF Abstract BibTeX arXiv:2306.16796

Code (0)

등록된 구현이 없습니다.

Tasks

Contact mechanicsmodel

Similar Papers 제목 키워드 기반

All-optical complex field imaging using diffractive processors

2024-01-30 · Jingxi Li, Yuhang Li, Tianyi Gan, Che-Yung Shen 외

Complex field imaging, which captures both the amplitude and phase information of input optical fields or objects, can offer rich structural insights into samples, such as their absorption and refractive index distributi…

AllImage Reconstruction

All-Optical Information Processing Capacity of Diffractive Surfaces

2020-07-25 · Onur Kulce, Deniz Mengu, Yair Rivenson, Aydogan Ozcan

Precise engineering of materials and surfaces has been at the heart of some of the recent advances in optics and photonics. These advances around the engineering of materials with new functionalities have also opened up …

Allimage-classificationImage Classification

NeRFrac: Neural Radiance Fields through Refractive Surface

2023-01-01 · ICCV 2023 1 · Yifan Zhan, Shohei Nobuhara, Ko Nishino, Yinqiang Zheng

Neural Radiance Fields (NeRF) is a popular neural expression for novel view synthesis. By querying spatial points and view directions, a multilayer perceptron (MLP) can be trained to output the volume density and rad…

NeRFNovel View Synthesis

Filament turnover is essential for continuous long range contractile flow in a model actomyosin cortex

2016-12-22

In this paper, we develop and analyze a minimal model for a 2D network of cross-linked actin filaments and myosin motors, representing the cortical cytoskeleton of eukaryotic cells. We implement coarse-grained representa…

Friction

Reliable Linearized Phase Retrieval for Near-Field Antenna Measurements with Truncated Measurement Surfaces

2021-09-20 · Alexander Paulus, Josef Knapp, Jonas Kornprobst, Thomas F. Eibert

Most methods tackling the phase retrieval problem of magnitude-only antenna measurements suffer from unrealistic sampling requirements, from unfeasible computational complexities, and, most severely, from the lacking rel…

Retrieval