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A Step Towards Worldwide Biodiversity Assessment: The BIOSCAN-1M Insect Dataset

2023-07-19 · NeurIPS 2023 11 · Zahra Gharaee, ZeMing Gong, Nicholas Pellegrino, Iuliia Zarubiieva, Joakim Bruslund Haurum, Scott C. Lowe, Jaclyn T. A. McKeown, Chris C. Y. Ho, Joschka McLeod, Yi-Yun C Wei, Jireh Agda, Sujeevan Ratnasingham, Dirk Steinke, Angel X. Chang, Graham W. Taylor, Paul Fieguth

In an effort to catalog insect biodiversity, we propose a new large dataset of hand-labelled insect images, the BIOSCAN-Insect Dataset. Each record is taxonomically classified by an expert, and also has associated genetic information including raw nucleotide barcode sequences and assigned barcode index numbers, which are genetically-based proxies for species classification. This paper presents a curated million-image dataset, primarily to train computer-vision models capable of providing image-based taxonomic assessment, however, the dataset also presents compelling characteristics, the study of which would be of interest to the broader machine learning community. Driven by the biological nature inherent to the dataset, a characteristic long-tailed class-imbalance distribution is exhibited. Furthermore, taxonomic labelling is a hierarchical classification scheme, presenting a highly fine-grained classification problem at lower levels. Beyond spurring interest in biodiversity research within the machine learning community, progress on creating an image-based taxonomic classifier will also further the ultimate goal of all BIOSCAN research: to lay the foundation for a comprehensive survey of global biodiversity. This paper introduces the dataset and explores the classification task through the implementation and analysis of a baseline classifier.

📄 PDF Abstract BibTeX arXiv:2307.10455

Code (2)

zahrag/BIOSCAN-1M 공식 구현 pytorch
bioscan-ml/dataset pytorch

Tasks

Classification

Methods 이 논문이 사용한 방법론

Softmax The Softmax output function transforms a previous layer's output into a vector of probabilities. It is commonly used for multiclass classification. Given an input vector $x$…
Linear Layer A Linear Layer is a projection $\mathbf{XW + b}$.
Layer Normalization Unlike batch normalization, Layer Normalization directly estimates the normalization statistics from the summed inputs…
Residual Connection 설명 없음
Attention 설명 없음
Dense Connections Dense Connections, or Fully Connected Connections, are a type of layer in a deep neural network that use a linear operation where every input is connected to every output…
Multi-Head Attention 설명 없음
Vision Transformer The Vision Transformer, or ViT, is a model for image classification that employs a Transformer-like architecture over…

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