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Cell segmentation with random ferns and graph-cuts

2016-02-17 · Arnaud Browet, Christophe De Vleeschouwer, Laurent Jacques, Navrita Mathiah, Bechara Saykali, Isabelle Migeotte

The progress in imaging techniques have allowed the study of various aspect of cellular mechanisms. To isolate individual cells in live imaging data, we introduce an elegant image segmentation framework that effectively extracts cell boundaries, even in the presence of poor edge details. Our approach works in two stages. First, we estimate pixel interior/border/exterior class probabilities using random ferns. Then, we use an energy minimization framework to compute boundaries whose localization is compliant with the pixel class probabilities. We validate our approach on a manually annotated dataset.

📄 PDF Abstract BibTeX arXiv:1602.05439

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Cell SegmentationImage SegmentationSemantic Segmentation

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