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DASGAN -- Joint Domain Adaptation and Segmentation for the Analysis of Epithelial Regions in Histopathology PD-L1 Images

2019-06-26 · Ansh Kapil, Tobias Wiestler, Simon Lanzmich, Abraham Silva, Keith Steele, Marlon Rebelatto, Guenter Schmidt, Nicolas Brieu

The analysis of the tumor environment on digital histopathology slides is becoming key for the understanding of the immune response against cancer, supporting the development of novel immuno-therapies. We introduce here a novel deep learning solution to the related problem of tumor epithelium segmentation. While most existing deep learning segmentation approaches are trained on time-consuming and costly manual annotation on single stain domain (PD-L1), we leverage here semi-automatically labeled images from a second stain domain (Cytokeratin-CK). We introduce an end-to-end trainable network that jointly segment tumor epithelium on PD-L1 while leveraging unpaired image-to-image translation between CK and PD-L1, therefore completely bypassing the need for serial sections or re-staining of slides. Extending the method to differentiate between PD-L1 positive and negative tumor epithelium regions enables the automated estimation of the PD-L1 Tumor Cell (TC) score. Quantitative experimental results demonstrate the accuracy of our approach against state-of-the-art segmentation methods.

📄 PDF Abstract BibTeX arXiv:1906.11118

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Domain AdaptationImage-to-Image TranslationSegmentationTranslation

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