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Deep Learning with Anatomical Priors: Imitating Enhanced Autoencoders in Latent Space for Improved Pelvic Bone Segmentation in MRI

2019-03-21 · Duc Duy Pham, Gurbandurdy Dovletov, Sebastian Warwas, Stefan Landgraeber, Marcus Jäger, Josef Pauli

We propose a 2D Encoder-Decoder based deep learning architecture for semantic segmentation, that incorporates anatomical priors by imitating the encoder component of an autoencoder in latent space. The autoencoder is additionally enhanced by means of hierarchical features, extracted by an U-Net module. Our suggested architecture is trained in an end-to-end manner and is evaluated on the example of pelvic bone segmentation in MRI. A comparison to the standard U-Net architecture shows promising improvements.

📄 PDF Abstract BibTeX arXiv:1903.09263

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DecoderSegmentationSemantic Segmentation

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Concatenated Skip Connection A Concatenated Skip Connection is a type of skip connection that seeks to reuse features by concatenating them to new layers, allowing more information to be retained from…
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Max Pooling Max Pooling is a pooling operation that calculates the maximum value for patches of a feature map, and uses it to create a downsampled (pooled) feature map. It is usually…
Convolution A convolution is a type of matrix operation, consisting of a kernel, a small matrix of weights, that slides over input data performing element-wise multiplication with the…
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