End-to-end semantic segmentation of personalized deep brain structures for non-invasive brain stimulation
Electro-stimulation or modulation of deep brain regions is commonly used in clinical procedures for the treatment of several nervous system disorders. In particular, transcranial direct current stimulation (tDCS) is widely used as an affordable clinical application that is applied through electrodes attached to the scalp. However, it is difficult to determine the amount and distribution of the electric field (EF) in the different brain regions due to anatomical complexity and high inter-subject variability. Personalized tDCS is an emerging clinical procedure that is used to tolerate electrode montage for accurate targeting. This procedure is guided by computational head models generated from anatomical images such as MRI. Distribution of the EF in segmented head models can be calculated through simulation studies. Therefore, fast, accurate, and feasible segmentation of different brain structures would lead to a better adjustment for customized tDCS studies. In this study, a single-encoder multi-decoders convolutional neural network is proposed for deep brain segmentation. The proposed architecture is trained to segment seven deep brain structures using T1-weighted MRI. Network generated models are compared with a reference model constructed using a semi-automatic method, and it presents a high matching especially in Thalamus (Dice Coefficient (DC) = 94.70%), Caudate (DC = 91.98%) and Putamen (DC = 90.31%) structures. Electric field distribution during tDCS in generated and reference models matched well each other, suggesting its potential usefulness in clinical practice.
Code (1)
Tasks
Brain SegmentationSemantic SegmentationSimilar Papers 제목 키워드 기반
Decoding Continuous Character-based Language from Non-invasive Brain Recordings
Deciphering natural language from brain activity through non-invasive devices remains a formidable challenge. Previous non-invasive decoders either require multiple experiments with identical stimuli to pinpoint cortical…
DecoderDevelopment of accurate human head models for personalized electromagnetic dosimetry using deep learning
The development of personalized human head models from medical images has become an important topic in the electromagnetic dosimetry field, including the optimization of electrostimulation, safety assessments, etc. Human…
SegmentationEnhancing Hierarchical Transformers for Whole Brain Segmentation with Intracranial Measurements Integration
Whole brain segmentation with magnetic resonance imaging (MRI) enables the non-invasive measurement of brain regions, including total intracranial volume (TICV) and posterior fossa volume (PFV). Enhancing the existing wh…
Brain SegmentationSegmentationBrain2Vec: A Deep Learning Framework for EEG-Based Stress Detection Using CNN-LSTM-Attention
Mental stress has become a pervasive factor affecting cognitive health and overall well-being, necessitating the development of robust, non-invasive diagnostic tools. Electroencephalogram (EEG) signals provide a direct w…
DiagnosticEEGElectroencephalogram (EEG)Brain-Shift: Unsupervised Pseudo-Healthy Brain Synthesis for Novel Biomarker Extraction in Chronic Subdural Hematoma
Chronic subdural hematoma (cSDH) is a common neurological condition characterized by the accumulation of blood between the brain and the dura mater. This accumulation of blood can exert pressure on the brain, potentially…
Anatomy