paper-with-me

Papers

Extracting Angina Symptoms from Clinical Notes Using Pre-Trained Transformer Architectures

2020-10-12 · Aaron S. Eisman, Nishant R. Shah, Carsten Eickhoff, George Zerveas, Elizabeth S. Chen, Wen-Chih Wu, Indra Neil Sarkar

Anginal symptoms can connote increased cardiac risk and a need for change in cardiovascular management. This study evaluated the potential to extract these symptoms from physician notes using the Bidirectional Encoder from Transformers language model fine-tuned on a domain-specific corpus. The history of present illness section of 459 expert annotated primary care physician notes from consecutive patients referred for cardiac testing without known atherosclerotic cardiovascular disease were included. Notes were annotated for positive and negative mentions of chest pain and shortness of breath characterization. The results demonstrate high sensitivity and specificity for the detection of chest pain or discomfort, substernal chest pain, shortness of breath, and dyspnea on exertion. Small sample size limited extracting factors related to provocation and palliation of chest pain. This study provides a promising starting point for the natural language processing of physician notes to characterize clinically actionable anginal symptoms.

📄 PDF Abstract BibTeX arXiv:2010.05757

Code (0)

등록된 구현이 없습니다.

Tasks

Language ModelingLanguage ModellingManagementSpecificity

Similar Papers 제목 키워드 기반

Iterative Prompt Refinement for Radiation Oncology Symptom Extraction Using Teacher-Student Large Language Models

2024-02-06 · Reza Khanmohammadi, Ahmed I Ghanem, Kyle Verdecchia, Ryan Hall 외

This study introduces a novel teacher-student architecture utilizing Large Language Models (LLMs) to improve prostate cancer radiotherapy symptom extraction from clinical notes. Mixtral, the student model, initially extr…

Prompt Engineering

Extracting Post-Acute Sequelae of SARS-CoV-2 Infection Symptoms from Clinical Notes via Hybrid Natural Language Processing

2025-08-17 · Zilong Bai, Zihan Xu, Cong Sun, Chengxi Zang 외 arxiv

Accurately and efficiently diagnosing Post-Acute Sequelae of COVID-19 (PASC) remains challenging due to its myriad symptoms that evolve over long- and variable-time intervals. To address this issue, we developed a hybrid…

Early Risk Assessment Model for ICA Timing Strategy in Unstable Angina Patients Using Multi-Modal Machine Learning

2024-08-08 · Candi Zheng, Kun Liu, Yang Wang, Shiyi Chen 외

Background: Invasive coronary arteriography (ICA) is recognized as the gold standard for diagnosing cardiovascular diseases, including unstable angina (UA). The challenge lies in determining the optimal timing for ICA in…

Extracting COVID-19 Diagnoses and Symptoms From Clinical Text: A New Annotated Corpus and Neural Event Extraction Framework

2020-12-02 · Kevin Lybarger, Mari Ostendorf, Matthew Thompson, Meliha Yetisgen

Coronavirus disease 2019 (COVID-19) is a global pandemic. Although much has been learned about the novel coronavirus since its emergence, there are many open questions related to tracking its spread, describing symptomol…

Event Extraction

Identification of Pediatric Respiratory Diseases Using Fine-grained Diagnosis System

2021-08-24 · Gang Yu, Zhongzhi Yu, Yemin Shi, Yingshuo Wang 외

Respiratory diseases, including asthma, bronchitis, pneumonia, and upper respiratory tract infection (RTI), are among the most common diseases in clinics. The similarities among the symptoms of these diseases precludes p…

Diagnostic