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High-confidence pseudo-labels for domain adaptation in COVID-19 detection

2024-03-20 · Robert Turnbull, Simon Mutch

This paper outlines our submission for the 4th COV19D competition as part of the `Domain adaptation, Explainability, Fairness in AI for Medical Image Analysis' (DEF-AI-MIA) workshop at the Computer Vision and Pattern Recognition Conference (CVPR). The competition consists of two challenges. The first is to train a classifier to detect the presence of COVID-19 from over one thousand CT scans from the COV19-CT-DB database. The second challenge is to perform domain adaptation by taking the dataset from Challenge 1 and adding a small number of scans (some annotated and other not) for a different distribution. We preprocessed the CT scans to segment the lungs, and output volumes with the lungs individually and together. We then trained 3D ResNet and Swin Transformer models on these inputs. We annotated the unlabeled CT scans using an ensemble of these models and chose the high-confidence predictions as pseudo-labels for fine-tuning. This resulted in a best cross-validation mean F1 score of 93.39\% for Challenge 1 and a mean F1 score of 92.15 for Challenge 2.

📄 PDF Abstract BibTeX arXiv:2403.13509

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Domain AdaptationFairnessMedical Image Analysis

Methods 이 논문이 사용한 방법론

Attention 설명 없음
Average Pooling 설명 없음
Dropout Dropout is a regularization technique for neural networks that drops a unit (along with connections) at training time with a specified probability $p$ (a common value is…
BPE Byte Pair Encoding, or BPE, is a subword segmentation algorithm that encodes rare and unknown words as sequences of subword units. The intuition is that various word…
Absolute Position Encodings Absolute Position Encodings are a type of position embeddings for [Transformer-based models] where positional encodings are…
Residual Connection 설명 없음
Linear Layer A Linear Layer is a projection $\mathbf{XW + b}$.
Position-Wise Feed-Forward Layer 설명 없음

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