JUMP: A joint multimodal registration pipeline for neuroimaging with minimal preprocessing
We present a pipeline for unbiased and robust multimodal registration of neuroimaging modalities with minimal pre-processing. While typical multimodal studies need to use multiple independent processing pipelines, with diverse options and hyperparameters, we propose a single and structured framework to jointly process different image modalities. The use of state-of-the-art learning-based techniques enables fast inferences, which makes the presented method suitable for large-scale and/or multi-cohort datasets with a diverse number of modalities per session. The pipeline currently works with structural MRI, resting state fMRI and amyloid PET images. We show the predictive power of the derived biomarkers using in a case-control study and study the cross-modal relationship between different image modalities. The code can be found in https: //github.com/acasamitjana/JUMP.
Code (1)
Similar Papers 제목 키워드 기반
ERNet: Unsupervised Collective Extraction and Registration in Neuroimaging Data
Brain extraction and registration are important preprocessing steps in neuroimaging data analysis, where the goal is to extract the brain regions from MRI scans (i.e., extraction step) and align them with a target brain …
Brain Image SegmentationImage RegistrationImage SegmentationMedical Image Registration+1One-shot Joint Extraction, Registration and Segmentation of Neuroimaging Data
Brain extraction, registration and segmentation are indispensable preprocessing steps in neuroimaging studies. The aim is to extract the brain from raw imaging scans (i.e., extraction step), align it with a target brain …
Brain Image SegmentationImage RegistrationImage SegmentationMedical Image Registration+3Cedalion Tutorial: A Python-based framework for comprehensive analysis of multimodal fNIRS & DOT from the lab to the everyday world
Functional near-infrared spectroscopy (fNIRS) and diffuse optical tomography (DOT) are rapidly evolving toward wearable, multimodal, and data-driven, AI-supported neuroimaging in the everyday world. However, current anal…
Image ReconstructionData AugmentationEnd-to-End Deep Learning for Structural Brain Imaging: A Unified Framework
Brain imaging analysis is fundamental in neuroscience, providing valuable insights into brain structure and function. Traditional workflows follow a sequential pipeline-brain extraction, registration, segmentation, parce…
Computational EfficiencyNew starting point registration method for tagged MRI tongue motion estimation
Accurate tongue motion estimation is essential for tongue function evaluation. The harmonic phase processing (HARP) method and the phase vector incompressible registration algorithm (PVIRA) based on HARP can generate mot…
Motion EstimationTAG