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Multiclass segmentation as multitask learning for drusen segmentation in retinal optical coherence tomography

2019-06-18 · Rhona Asgari, José Ignacio Orlando, Sebastian Waldstein, Ferdinand Schlanitz, Magdalena Baratsits, Ursula Schmidt-Erfurth, Hrvoje Bogunović

Automated drusen segmentation in retinal optical coherence tomography (OCT) scans is relevant for understanding age-related macular degeneration (AMD) risk and progression. This task is usually performed by segmenting the top/bottom anatomical interfaces that define drusen, the outer boundary of the retinal pigment epithelium (OBRPE) and the Bruch's membrane (BM), respectively. In this paper we propose a novel multi-decoder architecture that tackles drusen segmentation as a multitask problem. Instead of training a multiclass model for OBRPE/BM segmentation, we use one decoder per target class and an extra one aiming for the area between the layers. We also introduce connections between each class-specific branch and the additional decoder to increase the regularization effect of this surrogate task. We validated our approach on private/public data sets with 166 early/intermediate AMD Spectralis, and 200 AMD and control Bioptigen OCT volumes, respectively. Our method consistently outperformed several baselines in both layer and drusen segmentation evaluations.

📄 PDF Abstract BibTeX arXiv:1906.07679

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DecoderSegmentation

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