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Panoptic segmentation with highly imbalanced semantic labels

2022-03-03 · Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Andrew Janowczyk, Inti Zlobec, Dagmar Kainmueller

We describe here the panoptic segmentation method we devised for our participation in the CoNIC: Colon Nuclei Identification and Counting Challenge at ISBI 2022. Key features of our method are a weighted loss specifically engineered for semantic segmentation of highly imbalanced cell types, and a state-of-the art nuclei instance segmentation model, which we combine in a Hovernet-like architecture.

📄 PDF Abstract BibTeX arXiv:2203.11692

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Tasks

Instance SegmentationPanoptic SegmentationSegmentationSemantic Segmentation

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