paper-with-me

홈 › Papers

Position: Biology is the Challenge Physics-Informed ML Needs to Evolve

2025-10-29 · Julien Martinelli arxiv

Physics-Informed Machine Learning (PIML) has successfully integrated mechanistic understanding into machine learning, particularly in domains governed by well-known physical laws. This success has motivated efforts to apply PIML to biology, a field rich in dynamical systems but shaped by different constraints. Biological modeling, however, presents unique challenges: multi-faceted and uncertain prior knowledge, heterogeneous and noisy data, partial observability, and complex, high-dimensional networks. In this position paper, we argue that these challenges should not be seen as obstacles to PIML, but as catalysts for its evolution. We propose Biology-Informed Machine Learning (BIML): a principled extension of PIML that retains its structural grounding while adapting to the practical realities of biology. Rather than replacing PIML, BIML retools its methods to operate under softer, probabilistic forms of prior knowledge. We outline four foundational pillars as a roadmap for this transition: uncertainty quantification, contextualization, constrained latent structure inference, and scalability. Foundation Models and Large Language Models will be key enablers, bridging human expertise with computational modeling. We conclude with concrete recommendations to build the BIML ecosystem and channel PIML-inspired innovation toward challenges of high scientific and societal relevance.

📄 PDF Abstract BibTeX arXiv:2510.25368

Code (0)

등록된 구현이 없습니다.

Similar Papers 제목 키워드 기반

AI-Aristotle: A Physics-Informed framework for Systems Biology Gray-Box Identification

2023-09-29 · Nazanin Ahmadi Daryakenari, Mario De Florio, Khemraj Shukla, George Em Karniadakis

Discovering mathematical equations that govern physical and biological systems from observed data is a fundamental challenge in scientific research. We present a new physics-informed framework for parameter estimation an…

parameter estimationregressionSymbolic Regression

EFiGP: Eigen-Fourier Physics-Informed Gaussian Process for Inference of Dynamic Systems

2025-01-23 · Jianhong Chen, Shihao Yang

Parameter estimation and trajectory reconstruction for data-driven dynamical systems governed by ordinary differential equations (ODEs) are essential tasks in fields such as biology, engineering, and physics. These inver…

Computational EfficiencyDenoisingNumerical Integrationparameter estimation+1

Newton Informed Neural Operator for Computing Multiple Solutions of Nonlinear Partials Differential Equations

2024-05-23 · Wenrui Hao, Xinliang Liu, Yahong Yang

Solving nonlinear partial differential equations (PDEs) with multiple solutions using neural networks has found widespread applications in various fields such as physics, biology, and engineering. However, classical neur…

PINNacle: A Comprehensive Benchmark of Physics-Informed Neural Networks for Solving PDEs

2023-06-15 · Zhongkai Hao, Jiachen Yao, Chang Su, Hang Su 외

While significant progress has been made on Physics-Informed Neural Networks (PINNs), a comprehensive comparison of these methods across a wide range of Partial Differential Equations (PDEs) is still lacking. This study …

Benchmarking

Physics-Informed Real NVP for Satellite Power System Fault Detection

2024-05-27 · Carlo Cena, Umberto Albertin, Mauro Martini, Silvia Bucci 외

The unique challenges posed by the space environment, characterized by extreme conditions and limited accessibility, raise the need for robust and reliable techniques to identify and prevent satellite faults. Fault detec…

Fault Detection