paper-with-me

홈 › Papers

Trichomonas Vaginalis Segmentation in Microscope Images

2022-07-03 · Lin Li, Jingyi Liu, Shuo Wang, Xunkun Wang, Tian-Zhu Xiang

Trichomoniasis is a common infectious disease with high incidence caused by the parasite Trichomonas vaginalis, increasing the risk of getting HIV in humans if left untreated. Automated detection of Trichomonas vaginalis from microscopic images can provide vital information for the diagnosis of trichomoniasis. However, accurate Trichomonas vaginalis segmentation (TVS) is a challenging task due to the high appearance similarity between the Trichomonas and other cells (e.g., leukocyte), the large appearance variation caused by their motility, and, most importantly, the lack of large-scale annotated data for deep model training. To address these challenges, we elaborately collected the first large-scale Microscopic Image dataset of Trichomonas Vaginalis, named TVMI3K, which consists of 3,158 images covering Trichomonas of various appearances in diverse backgrounds, with high-quality annotations including object-level mask labels, object boundaries, and challenging attributes. Besides, we propose a simple yet effective baseline, termed TVNet, to automatically segment Trichomonas from microscopic images, including high-resolution fusion and foreground-background attention modules. Extensive experiments demonstrate that our model achieves superior segmentation performance and outperforms various cutting-edge object detection models both quantitatively and qualitatively, making it a promising framework to promote future research in TVS tasks. The dataset and results will be publicly available at: https://github.com/CellRecog/cellRecog.

📄 PDF Abstract BibTeX arXiv:2207.00973

Code (0)

등록된 구현이 없습니다.

Tasks

Objectobject-detectionObject DetectionSegmentation

Similar Papers 제목 키워드 기반

An Unsupervised Ensemble-based Markov Random Field Approach to Microscope Cell Image Segmentation

2014-10-27 · Balint Antal, Bence Remenyik, Andras Hajdu

In this paper, we propose an approach to the unsupervised segmentation of images using Markov Random Field. The proposed approach is based on the idea of Bit Plane Slicing. We use the planes as initial labellings for an …

Image SegmentationSegmentationSemantic Segmentation

Automatic Pollen Grain and Exine Segmentation from Microscope Images

2015-03-19 · François Chung, Tomás Rodríguez

In this article, we propose an automatic method for the segmentation of pollen grains from microscope images, followed by the automatic segmentation of their exine. The objective of exine segmentation is to separate the …

ClusteringSegmentation

Multi-element microscope optimization by a learned sensing network with composite physical layers

2020-06-27 · Kanghyun Kim, Pavan Chandra Konda, Colin L. Cooke, Ron Appel 외

Standard microscopes offer a variety of settings to help improve the visibility of different specimens to the end microscope user. Increasingly, however, digital microscopes are used to capture images for automated inter…

ClassificationGeneral Classification

Mineral segmentation using electron microscope images and spectral sampling through multimodal graph neural networks

2025-03-05 · Samuel Repka, Bořek Reich, Fedor Zolotarev, Tuomas Eerola 외

We propose a novel Graph Neural Network-based method for segmentation based on data fusion of multimodal Scanning Electron Microscope (SEM) images. In most cases, Backscattered Electron (BSE) images obtained using SEM do…

Graph Neural NetworkSegmentation

Single Neuron Segmentation using Graph-based Global Reasoning with Auxiliary Skeleton Loss from 3D Optical Microscope Images

2021-01-22 · Heng Wang, Yang song, Chaoyi Zhang, Jianhui Yu 외

One of the critical steps in improving accurate single neuron reconstruction from three-dimensional (3D) optical microscope images is the neuronal structure segmentation. However, they are always hard to segment due to t…

Segmentation