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Papers Retrosynthesis

“Retrosynthesis” 태그가 달린 논문 110편 · 필터 해제

DeepRetro: Retrosynthetic Pathway Discovery using Iterative LLM Reasoning

2025-07-07 · Shreyas Vinaya Sathyanarayana, Rahil Shah, Sharanabasava D. Hiremath, Rishikesh Panda 외

Retrosynthesis, the identification of precursor molecules for a target compound, is pivotal for synthesizing complex molecules, but faces challenges in discovering novel pathways beyond predefined templates. Recent large…

HallucinationLarge Language ModelRetrosynthesis

RETRO SYNFLOW: Discrete Flow Matching for Accurate and Diverse Single-Step Retrosynthesis

2025-06-04 · Robin Yadav, Qi Yan, Guy Wolf, Avishek Joey Bose 외

A fundamental problem in organic chemistry is identifying and predicting the series of reactions that synthesize a desired target product molecule. Due to the combinatorial nature of the chemical search space, single-ste…

RetrosynthesisSingle-step retrosynthesis

DiffER: Categorical Diffusion for Chemical Retrosynthesis

2025-05-29 · Sean Current, Ziqi Chen, Daniel Adu-Ampratwum, Xia Ning 외

Methods for automatic chemical retrosynthesis have found recent success through the application of models traditionally built for natural language processing, primarily through transformer neural networks. These models h…

Retrosynthesis

LLM-Augmented Chemical Synthesis and Design Decision Programs

2025-05-11 · Haorui Wang, Jeff Guo, Lingkai Kong, Rampi Ramprasad 외

Retrosynthesis, the process of breaking down a target molecule into simpler precursors through a series of valid reactions, stands at the core of organic chemistry and drug development. Although recent machine learning (…

Decision MakingMulti-step retrosynthesisNavigateRetrosynthesis+1

Leveraging Large Language Models for enzymatic reaction prediction and characterization

2025-05-08 · Lorenzo Di Fruscia, Jana Marie Weber

Predicting enzymatic reactions is crucial for applications in biocatalysis, metabolic engineering, and drug discovery, yet it remains a complex and resource-intensive task. Large Language Models (LLMs) have recently demo…

Drug DiscoveryIn-Context Learningparameter-efficient fine-tuningRetrosynthesis

Enhancing Chemical Reaction and Retrosynthesis Prediction with Large Language Model and Dual-task Learning

2025-05-05 · Xuan Lin, Qingrui Liu, Hongxin Xiang, Daojian Zeng 외

Chemical reaction and retrosynthesis prediction are fundamental tasks in drug discovery. Recently, large language models (LLMs) have shown potential in many domains. However, directly applying LLMs to these tasks faces t…

Drug DesignDrug DiscoveryLanguage ModelingLanguage Modelling+3

Chemical knowledge-informed framework for privacy-aware retrosynthesis learning

2025-02-26 · Guikun Chen, Xu Zhang, Xiaolin Hu, Yong liu 외

Chemical reaction data is a pivotal asset, driving advances in competitive fields such as pharmaceuticals, materials science, and industrial chemistry. Its proprietary nature renders it sensitive, as it often includes co…

Privacy PreservingRetrosynthesis

NatureLM: Deciphering the Language of Nature for Scientific Discovery

2025-02-11 · Yingce Xia, Peiran Jin, Shufang Xie, Liang He 외

Foundation models have revolutionized natural language processing and artificial intelligence, significantly enhancing how machines comprehend and generate human languages. Inspired by the success of these foundation mod…

Drug DiscoveryRetrosynthesisscientific discovery

Retro-Rank-In: A Ranking-Based Approach for Inorganic Materials Synthesis Planning

2025-02-06 · Thorben Prein, Elton Pan, Sami Haddouti, Marco Lorenz 외

Retrosynthesis strategically plans the synthesis of a chemical target compound from simpler, readily available precursor compounds. This process is critical for synthesizing novel inorganic materials, yet traditional met…

Multi-Label ClassificationMUlTI-LABEL-ClASSIFICATIONOut-of-Distribution GeneralizationRetrosynthesis

Enhancing Retrosynthesis with Conformer: A Template-Free Method

2025-01-21 · Jiaxi Zhuang, Qian Zhang, Ying Qian

Retrosynthesis plays a crucial role in the fields of organic synthesis and drug development, where the goal is to identify suitable reactants that can yield a target product molecule. Although existing methods have achie…

Retrosynthesis

Leveraging Large Language Models as Knowledge-Driven Agents for Reliable Retrosynthesis Planning

2025-01-15 · Qinyu Ma, Yuhao Zhou, Jianfeng Li

Identifying reliable synthesis pathways in materials chemistry is a complex task, particularly in polymer science, due to the intricate and often non-unique nomenclature of macromolecules. To address this challenge, we p…

Knowledge GraphsRetrievalRetrosynthesis

GDiffRetro: Retrosynthesis Prediction with Dual Graph Enhanced Molecular Representation and Diffusion Generation

2025-01-14 · Shengyin Sun, Wenhao Yu, Yuxiang Ren, Weitao Du 외

Retrosynthesis prediction focuses on identifying reactants capable of synthesizing a target product. Typically, the retrosynthesis prediction involves two phases: Reaction Center Identification and Reactant Generation. H…

molecular representationRetrosynthesis

ASKCOS: an open source software suite for synthesis planning

2025-01-03 · Zhengkai Tu, Sourabh J. Choure, Mun Hong Fong, Jihye Roh 외

The advancement of machine learning and the availability of large-scale reaction datasets have accelerated the development of data-driven models for computer-aided synthesis planning (CASP) in the past decade. Here, we d…

Decision MakingPredictionRetrosynthesis

Chimera: Accurate retrosynthesis prediction by ensembling models with diverse inductive biases

2024-12-06 · Krzysztof Maziarz, Guoqing Liu, Hubert Misztela, Aleksei Kornev 외

Planning and conducting chemical syntheses remains a major bottleneck in the discovery of functional small molecules, and prevents fully leveraging generative AI for molecular inverse design. While early work has shown t…

Retrosynthesis

Suitability of Large Language Models for Extraction of High-Quality Chemical Reaction Dataset from Patent Literature

2024-11-26 · Journal of Cheminformatics 2024 11 · Sarveswara Rao Vangala, Sowmya Ramaswamy Krishnan, Navneet Bung, Dhandapani Nandagopal 외

With the advent of artificial intelligence (AI), it is now possible to design diverse and novel molecules from previously unexplored chemical space. However, a challenge for chemists is the synthesis of such molecules. R…

Retrosynthesis

Retrieval-Retro: Retrieval-based Inorganic Retrosynthesis with Expert Knowledge

2024-10-28 · Heewoong Noh, Namkyeong Lee, Gyoung S. Na, Chanyoung Park

While inorganic retrosynthesis planning is essential in the field of chemical science, the application of machine learning in this area has been notably less explored compared to organic retrosynthesis planning. In this …

RetrievalRetrosynthesis

BatGPT-Chem: A Foundation Large Model For Retrosynthesis Prediction

2024-08-19 · Yifei Yang, Runhan Shi, Zuchao Li, Shu Jiang 외

Retrosynthesis analysis is pivotal yet challenging in drug discovery and organic chemistry. Despite the proliferation of computational tools over the past decade, AI-based systems often fall short in generalizing across …

Drug DiscoveryLanguage ModellingLarge Language ModelRetrosynthesis

Directly Optimizing for Synthesizability in Generative Molecular Design using Retrosynthesis Models

2024-07-16 · Jeff Guo, Philippe Schwaller

Synthesizability in generative molecular design remains a pressing challenge. Existing methods to assess synthesizability span heuristics-based methods, retrosynthesis models, and synthesizability-constrained molecular g…

Drug DiscoveryRetrosynthesis

Accelerating the inference of string generation-based chemical reaction models for industrial applications

2024-07-12 · Mikhail Andronov, Natalia Andronova, Michael Wand, Jürgen Schmidhuber 외

Template-free SMILES-to-SMILES translation models for reaction prediction and single-step retrosynthesis are of interest for industrial applications in computer-aided synthesis planning systems due to their state-of-the-…

PredictionRetrosynthesisSingle-step retrosynthesisTranslation

Double-Ended Synthesis Planning with Goal-Constrained Bidirectional Search

2024-07-08 · Kevin Yu, Jihye Roh, Ziang Li, Wenhao Gao 외

Computer-aided synthesis planning (CASP) algorithms have demonstrated expert-level abilities in planning retrosynthetic routes to molecules of low to moderate complexity. However, current search methods assume the suffic…

Retrosynthesisvalid
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