Papers Splice Site Prediction
“Splice Site Prediction” 태그가 달린 논문 7편 · 필터 해제
Fast and Low-Cost Genomic Foundation Models via Outlier Removal
We propose the first unified adversarial attack benchmark for Genomic Foundation Models (GFMs), named GERM. Unlike existing GFM benchmarks, GERM offers the first comprehensive evaluation framework to systematically asses…
Adversarial AttackAdversarial RobustnessComputational EfficiencyDNA analysis+5AdvanceSplice: Integrating N-gram one-hot encoding and ensemble modeling for enhanced accuracy
Accurate splice site prediction is a critical challenge in genomics, essential for understanding gene expression and disease-associated mutations. Splice sites mark the boundaries between exons and introns in genetic seq…
ClassificationData VisualizationEnsemble LearningFeature Engineering+2Identifying DNA Sequence Motifs Using Deep Learning
Splice sites play a crucial role in gene expression, and accurate prediction of these sites in DNA sequences is essential for diagnosing and treating genetic disorders. We address the challenge of splice site prediction …
Deep LearningPredictionSplice Site PredictionDNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genome
Decoding the linguistic intricacies of the genome is a crucial problem in biology, and pre-trained foundational models such as DNABERT and Nucleotide Transformer have made significant strides in this area. Existing works…
Computational EfficiencyCore Promoter DetectionCovid Variant PredictionData Compression+9Sequential Labelling and DNABERT For Splice Site Prediction in Homo Sapiens DNA
Genome sequencing technology has improved significantly in few last years and resulted in abundance genetic data. Artificial intelligence has been employed to analyze genetic data in response to its sheer size and variab…
PredictionSplice Site PredictionSpliceCombo: A Hybrid Technique efficiently use for Principal Component Analysis of Splice Site Prediction
The primary step in search of the gene prediction is an identification of the coding region from genomic DNA sequence. Gene structure in the case of a eukaryotic organism is composed of promoter, intron, start codon, exo…
feature selectionPredictionSensitivitySpecificity+1Tell Me Something New: A New Framework for Asynchronous Parallel Learning
We present a novel approach for parallel computation in the context of machine learning that we call "Tell Me Something New" (TMSN). This approach involves a set of independent workers that use broadcast to update each o…
BIG-bench Machine LearningSplice Site Prediction