Papers Virology
“Virology” 태그가 달린 논문 29편 · 필터 해제
GAMORA: A Gesture Articulated Meta Operative Robotic Arm for Hazardous Material Handling in Containment-Level Environments
The convergence of robotics and virtual reality (VR) has enabled safer and more efficient workflows in high-risk laboratory settings, particularly virology labs. As biohazard complexity increases, minimizing direct human…
Motion PlanningUnityVirologyAccess Controls Will Solve the Dual-Use Dilemma
AI safety systems face a dual-use dilemma. Since the same request can be either harmless or harmful depending on who made it and why, if the system makes decisions based solely on the request's content, it will refuse so…
VirologyLLMs Outperform Experts on Challenging Biology Benchmarks
This study systematically evaluates 27 frontier Large Language Models on eight biology benchmarks spanning molecular biology, genetics, cloning, virology, and biosecurity. Models from major AI developers released between…
MMLUVirologyVirology Capabilities Test (VCT): A Multimodal Virology Q&A Benchmark
We present the Virology Capabilities Test (VCT), a large language model (LLM) benchmark that measures the capability to troubleshoot complex virology laboratory protocols. Constructed from the inputs of dozens of PhD-lev…
Language ModelingLanguage ModellingLarge Language ModelVirologyExploration of Hepatitis B Virus Infection Dynamics through Virology-Informed Neural Network: A Novel Artificial Intelligence Approach
In this work, we introduce Virology-Informed Neural Networks (VINNs), a powerful tool for capturing the intricate dynamics of viral infection when data of some compartments of the model are not available. VINNs, an exten…
VirologyNonsuppressible viremia during HIV-1 therapy meets molecular virology
HIV-1 replication can be suppressed with antiretroviral therapy (ART), but individuals who stop taking ART soon become viremic again. Some people experience extended times of detectable viremia despite optimal adherence …
VirologyBridging the Gap: Enhancing LLM Performance for Low-Resource African Languages with New Benchmarks, Fine-Tuning, and Cultural Adjustments
Large Language Models (LLMs) have shown remarkable performance across various tasks, yet significant disparities remain for non-English languages, and especially native African languages. This paper addresses these dispa…
Clinical KnowledgeCollege MedicineCross-Lingual TransferMMLU+2Are We Done with MMLU?
Maybe not. We identify and analyse errors in the popular Massive Multitask Language Understanding (MMLU) benchmark. Even though MMLU is widely adopted, our analysis demonstrates numerous ground truth errors that obscure …
MMLUVirologyA FAIR and Free Prompt-based Research Assistant
This demo will present the Research Assistant (RA) tool developed to assist with six main types of research tasks defined as standardized instruction templates, instantiated with user input, applied finally as prompts to…
VirologyLarge Language Models for Scientific Information Extraction: An Empirical Study for Virology
In this paper, we champion the use of structured and semantic content representation of discourse-based scholarly communication, inspired by tools like Wikipedia infoboxes or structured Amazon product descriptions. These…
Text GenerationVirologyA picture guide to cancer progression and monotonic accumulation models: evolutionary assumptions, plausible interpretations, and alternative uses
Cancer progression and monotonic accumulation models were developed to discover dependencies in the irreversible acquisition of binary traits from cross-sectional data. They have been used in computational oncology and v…
VirologyExploring the evolution of research topics during the COVID-19 pandemic
The COVID-19 pandemic has changed the research agendas of most scientific communities, resulting in an overwhelming production of research articles in a variety of domains, including medicine, virology, epidemiology, eco…
ArticlesEpidemiologyVirologyAt the crossroads of epidemiology and biology: bridging the gap between SARS-CoV-2 viral strain properties and epidemic wave characteristics
The COVID-19 pandemic has given rise to numerous articles from different scientific fields (epidemiology, virology, immunology, airflow physics...) without any effort to link these different insights. In this review, we …
ArticlesEpidemiologyVirologyEfficient Cavity Searching for Gene Network of Influenza A Virus
High order structures (cavities and cliques) of the gene network of influenza A virus reveal tight associations among viruses during evolution and are key signals that indicate viral cross-species infection and cause pan…
VirologyRapid and stain-free quantification of viral plaque via lens-free holography and deep learning
We present a rapid and stain-free quantitative viral plaque assay using lensfree holographic imaging and deep learning. This cost-effective, compact, and automated device significantly reduces the incubation time needed …
SpecificityVirologyRamanNet: A generalized neural network architecture for Raman Spectrum Analysis
Raman spectroscopy provides a vibrational profile of the molecules and thus can be used to uniquely identify different kind of materials. This sort of fingerprinting molecules has thus led to widespread application of Ra…
BIG-bench Machine LearningVirologyScaling Language Models: Methods, Analysis & Insights from Training Gopher
Language modelling provides a step towards intelligent communication systems by harnessing large repositories of written human knowledge to better predict and understand the world. In this paper, we present an analysis o…
Abstract AlgebraAnachronismsAnalogical SimilarityAnalytic Entailment+143On the origins of the Omicron variant of the SARS-CoV-2 virus
A possible explanation based on first principles for the appearance of the Omicron variant of the SARS-CoV-2 virus is proposed involving coinfection with HIV. The gist is that the resultant HIV-induced immunocompromise a…
VirologyApplication of Machine Learning in understanding plant virus pathogenesis: Trends and perspectives on emergence, diagnosis, host-virus interplay and management
Inclusion of high throughput technologies in the field of biology has generated massive amounts of biological data in the recent years. Now, transforming these huge volumes of data into knowledge is the primary challenge…
BIG-bench Machine LearningManagementVirologySARS-CoV-2's closest relative, RaTG13, was generated from a bat transcriptome not a fecal swab: implications for the origin of COVID-19
RaTG13 is the closest related coronavirus genome phylogenetically to SARS-CoV-2, consequently understanding its provenance is of key importance to understanding the origin of the COVID-19 pandemic. The RaTG13 NGS dataset…
Cultural Vocal Bursts Intensity PredictionVirology