Medical Image Segmentation
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Benchmarks
Kvasir-SEG
CVC-ClinicDB
CVC-ColonDB
ETIS-LARIBPOLYPDB
Synapse multi-organ CT
MoNuSeg
2018 Data Science Bowl
GlaS
BKAI-IGH NeoPolyp-Small
ACDC
CVC-VideoClinicDB
DRIVE
ISIC 2018
ISIC2018
ROBUST-MIS
Brain US
CHASE_DB1
EM
Kvasir-Instrument
RITE
ISIC 2018
KvasirCapsule-SEG
LiTS2017
AMOS
ASU-Mayo Clinic dataset
Autoimmune Dataset
Autooral dataset
CHAOS MRI Dataset
Cell
ENSeg
HSVM
Hyper-Kvasir Dataset
MoNuSAC
MoNuSeg 2018
MosMedData
PROMISE12
SegPC-2021
Synapse
TNBC
iSEG 2017 Challenge
Most implemented
U-Net: Convolutional Networks for Biomedical Image Segmentation
Densely Connected Convolutional Networks
SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentation
Attention U-Net: Learning Where to Look for the Pancreas
UNet++: A Nested U-Net Architecture for Medical Image Segmentation
Papers
Uncertainty-Guided Handshake: Efficient Human-in-the-Loop Refinement for Surgical-Grade Glioma Segmentation
While state-of-the-art automated models for medical image segmentation achieve high mean performance, they frequently suffer from localized, catastrophic failures that preclude safe clinical deployment, particularly in n…
Medical Image SegmentationInteractive SegmentationLightMIS: Ultra-Lightweight Medical Image Segmentation Without a Stage-Wise Decoder
We present LightMIS, a scalable family of ultra-lightweight convolutional networks for 2D binary medical image segmentation without a learned stage-wise decoder. LightMIS aligns the outputs of a five-level encoder to a c…
Medical Image SegmentationDe-GAN - Dynamic Parameter Tuned GAN for 3D Medical Image Segmentation: A Step Towards Generalisation
Brain tumor segmentation remains difficult because enhancing tumor (ET) has low contrast and overlaps surrounding tissue, while scanner and site variation causes domain shift. We propose DE-GAN, a contrast-enhancing cond…
Medical Image SegmentationBrain Tumor SegmentationWhen Fusion Fails: Corruption-Aware Rebalanced Fusion for Multi-Modal Medical Image Segmentation
Multi-modal medical image segmentation leverages complementary diagnostic information, yet fusion can underperform single-modality baselines when spatially aligned inputs differ in quality. Here, "corruption" primarily d…
Medical Image SegmentationFrom Few-Shot Segmentation to Clinician-in-the-Loop Medical Image Analysis
Few-shot medical image segmentation (FSMIS) seeks to delineate unseen structures from a small support set, but its standard formulation fixes task-defining evidence before inference. This assumption is fragile when query…
Medical Image SegmentationInteractive SegmentationTest-time AdaptationLightMedSeg-ISLES: Stroke Lesion Segmentation with 81x Fewer Parameters than nnU-Net
Large networks and ensembles often lead medical image segmentation challenges, but their storage and inference demands complicate deployment. We present LightMedSeg-ISLES, a 1.26-million-parameter pipeline for T1-weighte…
Medical Image SegmentationLesion Segmentation