paper-with-me

Unconditional Molecule Generation

2개 벤치마크 · 논문 10편 · 이 태스크의 논문 보기 →

Benchmarks

GEOM-DRUGS

결과 5개

QM9

결과 4개

Most implemented

Papers

Augmenting Molecular Language Models with Local $n$-gram Memory

2026-06-10 · Xinni Zhang, Zijing Liu, He Cao, Yu Li 외 arxiv

Transformer-based language models for SMILES strings suffer from a locality gap: standard character-level tokenization fragments chemically meaningful motifs, forcing models to repeatedly learn local syntax at the expens…

Unconditional Molecule GenerationForward reaction predictionSingle-step retrosynthesis

InertialAR: Autoregressive 3D Molecule Generation with Inertial Frames

2025-10-31 · Haorui Li, Weitao Du, Yuqiang Li, Hongyu Guo 외 arxiv

Transformer-based autoregressive models have emerged as a unifying paradigm across modalities such as text and images, but their extension to 3D molecule generation remains underexplored. The gap stems from two fundament…

Unconditional Molecule Generation

All-atom Diffusion Transformers: Unified generative modelling of molecules and materials

2025-03-05 · Chaitanya K. Joshi, Xiang Fu, Yi-Lun Liao, Vahe Gharakhanyan 외

Diffusion models are the standard toolkit for generative modelling of 3D atomic systems. However, for different types of atomic systems - such as molecules and materials - the generative processes are usually highly spec…

AllUnconditional Crystal GenerationUnconditional Molecule Generation

Geometric Representation Condition Improves Equivariant Molecule Generation

2024-10-04 · Zian Li, Cai Zhou, Xiyuan Wang, Xingang Peng 외

Recent advancements in molecular generative models have demonstrated substantial potential in accelerating scientific discovery, particularly in drug design. However, these models often face challenges in generating high…

Drug Designscientific discoveryUnconditional Molecule Generation

SemlaFlow -- Efficient 3D Molecular Generation with Latent Attention and Equivariant Flow Matching

2024-06-11 · Ross Irwin, Alessandro Tibo, Jon Paul Janet, Simon Olsson

Methods for jointly generating molecular graphs along with their 3D conformations have gained prominence recently due to their potential impact on structure-based drug design. Current approaches, however, often suffer fr…

3D GenerationDrug DesignUnconditional Molecule Generation

Symphony: Symmetry-Equivariant Point-Centered Spherical Harmonics for 3D Molecule Generation

2023-11-27 · Ameya Daigavane, Song Kim, Mario Geiger, Tess Smidt

We present Symphony, an $E(3)$-equivariant autoregressive generative model for 3D molecular geometries that iteratively builds a molecule from molecular fragments. Existing autoregressive models such as G-SchNet and G-Sp…

3D geometry3D Molecule GenerationUnconditional Molecule Generation

전체 10편 보기 →