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An Optimization Framework for Processing and Transfer Learning for the Brain Tumor Segmentation

2024-02-10 · Tianyi Ren, Ethan Honey, Harshitha Rebala, Abhishek Sharma, Agamdeep Chopra, Mehmet Kurt

Tumor segmentation from multi-modal brain MRI images is a challenging task due to the limited samples, high variance in shapes and uneven distribution of tumor morphology. The performance of automated medical image segmentation has been significant improvement by the recent advances in deep learning. However, the model predictions have not yet reached the desired level for clinical use in terms of accuracy and generalizability. In order to address the distinct problems presented in Challenges 1, 2, and 3 of BraTS 2023, we have constructed an optimization framework based on a 3D U-Net model for brain tumor segmentation. This framework incorporates a range of techniques, including various pre-processing and post-processing techniques, and transfer learning. On the validation datasets, this multi-modality brain tumor segmentation framework achieves an average lesion-wise Dice score of 0.79, 0.72, 0.74 on Challenges 1, 2, 3 respectively.

📄 PDF Abstract BibTeX arXiv:2402.07008

Code (1)

kurtlabuw/re-diffinet pytorch

Tasks

Brain Tumor SegmentationImage SegmentationMedical Image SegmentationSegmentationSemantic SegmentationTransfer LearningTumor Segmentation

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ReLU How Do I Communicate to Expedia? How Do I Communicate to Expedia? – Call ☎️ +1-(888) 829 (0881) or +1-805-330-4056 or +1-805-330-4056 for Live Support & Special Travel…
Convolution A convolution is a type of matrix operation, consisting of a kernel, a small matrix of weights, that slides over input data performing element-wise multiplication with the…
Concatenated Skip Connection A Concatenated Skip Connection is a type of skip connection that seeks to reuse features by concatenating them to new layers, allowing more information to be retained from…
Max Pooling Max Pooling is a pooling operation that calculates the maximum value for patches of a feature map, and uses it to create a downsampled (pooled) feature map. It is usually…
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