Leveraging Complementary Attention maps in vision transformers for OCT image analysis
Optical Coherence Tomography (OCT) scan yields all possible cross-section images of a retina for detecting biomarkers linked to optical defects. Due to the high volume of data generated, an automated and reliable biomarker detection pipeline is necessary as a primary screening stage. We outline our new state-of-the-art pipeline for identifying biomarkers from OCT scans. In collaboration with trained ophthalmologists, we identify local and global structures in biomarkers. Through a comprehensive and systematic review of existing vision architectures, we evaluate different convolution and attention mechanisms for biomarker detection. We find that MaxViT, a hybrid vision transformer combining convolution layers with strided attention, is better suited for local feature detection, while EVA-02, a standard vision transformer leveraging pure attention and large-scale knowledge distillation, excels at capturing global features. We ensemble the predictions of both models to achieve first place in the IEEE Video and Image Processing Cup 2023 competition on OCT biomarker detection, achieving a patient-wise F1 score of 0.8527 in the final phase of the competition, scoring 3.8\% higher than the next best solution. Finally, we used knowledge distillation to train a single MaxViT to outperform our ensemble at a fraction of the computation cost.
Code (0)
등록된 구현이 없습니다.
Tasks
Knowledge DistillationMethods 이 논문이 사용한 방법론
Similar Papers 제목 키워드 기반
Dual-Stream Attention Transformers for Sewer Defect Classification
We propose a dual-stream multi-scale vision transformer (DS-MSHViT) architecture that processes RGB and optical flow inputs for efficient sewer defect classification. Unlike existing methods that combine the predictions …
ClassificationOptical Flow EstimationCoBra: Complementary Branch Fusing Class and Semantic Knowledge for Robust Weakly Supervised Semantic Segmentation
Leveraging semantically precise pseudo masks derived from image-level class knowledge for segmentation, namely image-level Weakly Supervised Semantic Segmentation (WSSS), still remains challenging. While Class Activation…
SegmentationSemantic SegmentationWeakly supervised Semantic SegmentationWeakly-Supervised Semantic SegmentationCross-attention Spatio-temporal Context Transformer for Semantic Segmentation of Historical Maps
Historical maps provide useful spatio-temporal information on the Earth's surface before modern earth observation techniques came into being. To extract information from maps, neural networks, which gain wide popularity …
Earth ObservationSemantic SegmentationTemporal SequencesPolaFormer: Polarity-aware Linear Attention for Vision Transformers
Linear attention has emerged as a promising alternative to softmax-based attention, leveraging kernelized feature maps to reduce complexity from quadratic to linear in sequence length. However, the non-negative constrain…
SAG-ViT: A Scale-Aware, High-Fidelity Patching Approach with Graph Attention for Vision Transformers
Vision Transformers (ViTs) have redefined image classification by leveraging self-attention to capture complex patterns and long-range dependencies between image patches. However, a key challenge for ViTs is efficiently …
Graph Attentionimage-classificationImage Classification